Gene Information

Name : SEEB0189_00370 (SEEB0189_00370)
Accession : YP_008258292.1
Strain :
Genome accession: NC_021817
Putative virulence/resistance : Unknown
Product : transposase IS1113
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 68052 - 69251 bp
Length : 1200 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGACGAAAAGAAACTCAAAGCACTGGCGGCTGAACTGGCTAAGGGCCTTAAAACCGAAGCCGACCTCAATCAGTTTTC
CCGTATGCTGACGAAATTAACCGTCGAAACAGCGCTCAATGCGGAGCTGACTGACCACTTCGGGCATGAGAAAAATGCGC
CCAAAACAGATTCAAACACCCGCAATGGCTACTCGTCAAAAACGGTGTTATGCGATGATGGCGAGATCGAACTGAACACG
CCGCGTGACCGTGAAAACACCTTCGAGCCGCAGCTGATTAAGAAGCACCAGACGCGCATTACTCAGATGGACAGCCAGAT
TTTATCCCTCTACGCCAAAGGCATGACTACCCGCGAAATCGTCGCCACCTTCAAAGAAATGTACGACGCCGATGTGTCAC
CCACGCTGATATCTAAGGTCACCGACACGGTAAAAGAACAGGTTACTGAGTGGCAGTTGGATGCGCTGTATCCCATTGTT
TACATGGACTGTATCGTCGTAAAAGTCCGTCAGAACGGGAGTGTGATAAACAAGGCCGTCTTCCTGGCGCTGGGGATCAA
TACCGAAGGCCAGAAAGAGTTGCCGGGCATGTGGCTGGCCGAAAACGAAGGCGCAAAGCTCTGGCTGAGTGTGCTGACGG
AGCTGAAAAAACGTGGCCTCCAGGACATCCTGATAGCCTGCGTGGACGGTCTTAAGGGCTTCCCGGATGCGATAAACAGC
GTCTTCCCGCAGACCCATATCCAGCTGTGCATCATCCATATGGTGCGTAACAGCCTGAAATACGTGTCCTGGAAGGACTA
CAAAGCCGTCACCAGCGGCTTGAAGACTGTCTATCAGGCCCCGACCAAAGAGGCGGCACTGATGGCGCTCGATGCGTTCG
CGGAAGTCTGGGACGATAAATATCCGCAAATCAGCAAAAGCTGGCGTGCGCACTGGGAAAACCTCAATACGCTCTTCAGT
TATCCGCCGGATATCCGCAAGGCCATCTACACCACGAACGAAATCGAATCGCTTAACAGTGTGATCCGGGCTGCGATTAA
GAAACGCAAAGTGTTCCCGACGGATGACTCGGTACGAAAGGTTATTTATCTGGCGATCAAAGGTGCGTCGAAAAAATGGA
GTATGCCGATCCAGAACTGGCGGTTAGCAATGAGCCGTTTTATTATCGAGTTCGGTGACCGCCTGAGCGATCACCTTTAA

Protein sequence :
MDEKKLKALAAELAKGLKTEADLNQFSRMLTKLTVETALNAELTDHFGHEKNAPKTDSNTRNGYSSKTVLCDDGEIELNT
PRDRENTFEPQLIKKHQTRITQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDTVKEQVTEWQLDALYPIV
YMDCIVVKVRQNGSVINKAVFLALGINTEGQKELPGMWLAENEGAKLWLSVLTELKKRGLQDILIACVDGLKGFPDAINS
VFPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKTVYQAPTKEAALMALDAFAEVWDDKYPQISKSWRAHWENLNTLFS
YPPDIRKAIYTTNEIESLNSVIRAAIKKRKVFPTDDSVRKVIYLAIKGASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 6e-167 93
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 6e-83 46