Gene Information

Name : CFSAN001921_24790 (CFSAN001921_24790)
Accession : YP_008258215.1
Strain :
Genome accession: NC_021815
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 218562 - 218981 bp
Length : 420 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGAATTACAGGACTGGCGAAAAGAACCTCGTAAAAAGTATTCGAATGAATTCAAACTTCGTATGGTTGAACTGGCATC
ACAACCCGGTGCTTGTGTGGCTCAGATTGCTCGAGAAAATGGCGTCAATGATAATGTTATTTTCAAATGGCTCAGACTTT
GGCAAAACGAAGGGCGTATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAG
ATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCACCCAGACTACTGTCAGTGCCAGCTC
CTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACTGTGTTGATCCGTGAAC
TGACCGGGAGGGGACGATGA

Protein sequence :
MELQDWRKEPRKKYSNEFKLRMVELASQPGACVAQIARENGVNDNVIFKWLRLWQNEGRISRRLPVTTSSDTGVELLPVE
ITPDEPKEPVAALTPSLSTQTTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 3e-57 93
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 6e-54 88
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 1e-54 88
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 1e-42 86
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 2e-47 85
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 2e-47 85
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 2e-45 79
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 1e-32 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_24790 YP_008258215.1 transposase VFG1672 Protein 5e-43 86
CFSAN001921_24790 YP_008258215.1 transposase VFG1666 Protein 1e-45 79
CFSAN001921_24790 YP_008258215.1 transposase VFG1738 Protein 3e-33 59