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Name : CFSAN001921_24660 (CFSAN001921_24660) Accession : YP_008258189.1 Strain : Genome accession: NC_021815 Putative virulence/resistance : Virulence Product : MFS transporter Function : - COG functional category : - COG ID : - EC number : - Position : 192579 - 193859 bp Length : 1281 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGT GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCTGGCGGTTCGCTGGCGCTTG CCGGTGCGACAACCCTGTTTATGCTACCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAACGCTGGCGGCTTCCG CCCGGTAGCCCGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGACGATTGCCGC AGCGATTGGCTGGTTCGGGCGAGAAGGGGGATTTCCCGATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAG GTACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGCGTCGATCAACTGACCCGTGCGGGTTACGGCTGGGGA AACAGCGTGCAGGTCGGCGGCAGCTATCTGGGCATGATGTGCGGCGGCGGGGTGTTCCTGATGCTGTCGGCAGCATCCGG CTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTCCCGCTGTGGCGCATTACGGAGCCGACGC GAACAGAGACTATCCCGCATATTCCGGCGTTAGGTTATGCGCTACGGAGGAAACAGGCGCGCCTGGGCTTACTGCTGGTA TTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGTTGTTGGATCATGGGTTAAGCATGTCCGC GTTGGGCGCGCTGTTTAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACGCTGGCCGGTGGATTGCTGATGAAATACA CCTCACCCGGCAGAGCGCTGTTGATGACTTATGGCGTCCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGCTCATGATG GTGCCGGGTCATCTGTTGCTGCCGATTCTCCAGTGTCTGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG TCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGG CAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGGCTATGCGACCTGCTTCCTGTTTGCCGGG GCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGTATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTG A Protein sequence : MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP PGSPERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRAGYGWG NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIMALSLPLWRITEPTRTETIPHIPALGYALRRKQARLGLLLV LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLMTYGVQGIALLAVVMTLMM VPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYATCFLFAG AFTLLAAWVAYIRLYSARELMTSAID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| irp8 | YP_001006811.1 | putative signal transducer | Not tested | HPI | Protein | 3e-126 | 98 |
| irp8 | YP_002346906.1 | signal transducer | Not tested | HPI | Protein | 7e-127 | 98 |
| ybtX | YP_070128.1 | MFS superfamily transporter signal transducer | Virulence | HPI | Protein | 7e-127 | 98 |
| irp8 | CAB46571.1 | signal transducer, Irp8 | Virulence | HPI | Protein | 3e-125 | 98 |
| ybtX | YP_853071.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 1e-125 | 98 |
| ybtX | CAA21386.1 | - | Virulence | HPI | Protein | 4e-126 | 98 |
| ybtX | NP_669702.1 | hypothetical protein | Virulence | HPI | Protein | 3e-126 | 98 |
| ybtX | NP_993011.1 | signal transducer | Virulence | HPI | Protein | 3e-126 | 98 |
