Gene Information

Name : CFSAN001921_24645 (CFSAN001921_24645)
Accession : YP_008258186.1
Strain :
Genome accession: NC_021815
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 187668 - 188627 bp
Length : 960 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACGGAGTCACCGCAAACGCAATCTGAAATCTCTATTCACCAGTTGGTGATCGGGAAACCTGCAAACGATGGCAATAT
TCCTGCTCAGTGTGAACTGCTGCGCTGTTCGTTGCAGGAAGGTATGGATATTTTGCTCTGGAGGGGCCATTTTGCGCGGC
CTGAGACGTTGCAGCTACACGACGATCTGGGCAGGATTAACTTCTCATGCATCCTGGAAGGCACATCACGCTTTGCAATT
CAGGGACTCAGGCGCCACACCGACTGGGAGCTTGCGCGCAATCGCCATTACATTACCCATACACCAGACTGCCGCGGCAG
CGCCTCCTATTGTGGCCGATTCGAGAGCATTACCCTTTCCTTCAGCCCTGAAACCCTCGCGCTGTGGGTGCCGGATATTA
ACGCGGTCATTAAGAACAAGATCGACTCCCAATGCTGTTGCCAGCAGCAGCGTTGTAATGCTGAAACCCACTTAACGGCT
CAGACTTTACGTCACGCGCTGATGCGCATGCACGGCGGCTTCAGCCATGAACAAAAGCCGTCGACGCTATGGTTGCAGGG
GCAAAGTCTGGTCATGCTCAGTCTGGTGCTGGATGAACATCGCGAAGACGCCAGTTGTCTCTCCTGCCACTTCAACCCGA
TGGAACGCCAGAAACTGCTGCGGGCGAAGGATCTGCTGCTGGCTGATCTGACGCAAGCGCCGGGCGTCGCGGAACTGGCC
AGAGAGTCCGGTCTGAGCGTTCTCAAAATTAAGCGAGGCTTCCGCGTTCTGTTCAACAACAGCGTCTATGGCCTGTTTCA
GGCTGAACGAATGCAGGAAGCCAGAAGACGCCTGGCCAACGGCAATACCTCCGTCATGACGGTGGCAGCCGATCTGGGCT
ATGCCAACGCCAGCCATTTCTCTACCGCCTTCCAGAAACAGTTTGGCGTAACCCCTTCGACCTTTAAACGCGTGATGTAA

Protein sequence :
MTESPQTQSEISIHQLVIGKPANDGNIPAQCELLRCSLQEGMDILLWRGHFARPETLQLHDDLGRINFSCILEGTSRFAI
QGLRRHTDWELARNRHYITHTPDCRGSASYCGRFESITLSFSPETLALWVPDINAVIKNKIDSQCCCQQQRCNAETHLTA
QTLRHALMRMHGGFSHEQKPSTLWLQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELA
RESGLSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHFSTAFQKQFGVTPSTFKRVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtA NP_993008.1 transcriptional regulator YbtA Virulence HPI Protein 1e-139 99
ybtA YP_070125.1 transcriptional regulator YbtA Virulence HPI Protein 1e-139 99
ybtA CAA21389.1 - Virulence HPI Protein 1e-139 99
APECO1_1057 YP_853074.1 AraC family transcriptional regulator Not tested PAI IV APEC-O1 Protein 5e-139 99
ybtA YP_002346903.1 transcriptional regulator YbtA Virulence HPI Protein 1e-139 99
ybtA NP_669705.1 AraC family transcriptional regulator Virulence HPI Protein 1e-139 99
ybtA CAB46574.1 yersiniabactin transcriptional regulator, YbtA Virulence HPI Protein 3e-138 98
ybtA YP_001006814.1 transcriptional regulator YbtA Not tested HPI Protein 5e-138 98