Gene Information

Name : CFSAN001921_24520 (CFSAN001921_24520)
Accession : YP_008258161.1
Strain :
Genome accession: NC_021815
Putative virulence/resistance : Unknown
Product : transposase IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 144860 - 145510 bp
Length : 651 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGCTGGAGGCTTATCGTATCAGCGTCCGGCGGGGATGCGGGTTGCTGATGCAGAGCAGAACCGTTTACCACTGGCAGAG
CCGGCGTGACGATCGGGCGATAACCCTGCGTATCCGGGAAATAGCGGAAACCCGGATACGCTACGGTTGCCCGCGTATTC
ATATTCAGTTGCGCCGGGAGGGATGGCCTGTTAACCACAAGAAAACCCACCGGATTTATTGCCTGGAAGGCCTGAACCTG
CGCAGAAAACGTCCCCGCAGACATGTCAGTGCAGCACGCCGTCAGCAGCGCCCGGTCCTGACGCATGTCGATCAGTGCTG
GAGTATGGATTTTGTGTCAGATAATCTGTTTAACGGGCGGCGTTTTCGGGCGCTGACTGTAGTGGATAATTTTAGTCGGG
AATGCCTGGCGATCCATGCCGGAAAATCGTTAAAAGGCGAGGATGTGGTCAGAATAATGGAGGCACTGCGGGTGCTGGAT
AAGCGGCTGCCGGTACGAATCCAGGCGGATAACGGCAGCGAATTTATCTCAAAAAGTCTGGATAAATGGGCGTATGAACA
CGGCGTCACAATGGACTTCTCGCGCCCCGGAAAGCCGACAGATAACCCGTTTATTGAATCATTTGTAAGCGTTAACGGAG
TGCCGTATTGA

Protein sequence :
MLEAYRISVRRGCGLLMQSRTVYHWQSRRDDRAITLRIREIAETRIRYGCPRIHIQLRREGWPVNHKKTHRIYCLEGLNL
RRKRPRRHVSAARRQQRPVLTHVDQCWSMDFVSDNLFNGRRFRALTVVDNFSRECLAIHAGKSLKGEDVVRIMEALRVLD
KRLPVRIQADNGSEFISKSLDKWAYEHGVTMDFSRPGKPTDNPFIESFVSVNGVPY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 7e-34 42
EXA10 ABD94679.1 IS407 transposase OrfB Not tested ExoU island A Protein 6e-21 41
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 7e-35 41