|
Name : CFSAN001921_24460 (CFSAN001921_24460) Accession : YP_008258149.1 Strain : Genome accession: NC_021815 Putative virulence/resistance : Unknown Product : transposase Tn21 Function : - COG functional category : - COG ID : - EC number : - Position : 130136 - 132916 bp Length : 2781 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGCCCGTCGATGAGCCTCCGTTTCCGCCCCTGTTGCGCATGGTGGCCGCGCAACTCAAGATGCCAGTGGAAAGTTGGAG CGAGTACGGCCAGCGCGAACAGACACGGCGGGAGCACTTGGTCGAGCTGCAAACGGTTTTTGGGTTCAAGCCCTTCACCA TGAGCCACTATCGGCAAGCCGTGCATACATTGACCGAGCTGGCCTTGCAGACCGACAAAGGCATCGTGCTGGCGAGCGCA CTTGTCGAGAATCTGCGGCGGCAGAGCATTATCCTGCCCGCCATGAATGCCATCGAGCGCGCAAGCGCCGAGGCCATCAC CCGTGCCAACCGACGCATTTACGCGGCGCTGACCGATTCTTTGTTATCACCCCACCGTCAGCGCCTGGACGAACTTCTCA AGCGCAAGGACGGCAGTAAAGTGACGTGGCTGGCATGGCTGCGCCAGTCGCCTGCCAAACCGAACTCTCGCCACATGCTC GAACATATTGAGCGCCTGAAATCCTGGCAAGCACTTGATCTGCCCGCAGGCATCGAGCGGCAGGTTCACCAGAACCGCCT GCTCAAAATCGCTCGTGAAGGTGGCCAGATGACGCCTGCTGATCTGGCAAAGTTCGAGGTGCAACGACGCTATGCCACGC TGGTAGCGCTGGCCATCGAAGGCATGGCCACCGTCACCGATGAAATCATCGACCTTCACGATCGCATCATCGGCAAGCTG TTCAACGCGGCCAAGAACAAGCATCAGCAGCAGTTCCAGGCTTCCGGCAAGGCGATCAACGACAAGGTGCGGATGTATGG GCGCATCGGTCAAGCGTTGATTGAGGCCAAGCAAAGCGGCAGCGATCCGTTCGCCGCCATCGAGGCCGTTATGCCCTGGG ACACCTTCGCCGCCAGCGTCACCGAAGCGCAAACATTGGCGCGGCCTGCCGACTTTGATTTCCTGCACCACATCGGTGAA AGCTATGCCACGCTACGCCGCTACGCGCCGCAGTTCCTGGGCGTGCTCAAATTGCGGGCTGCGCCCGCCGCCAAGGGTGT GCTCGATGCCATCGACATGCTGCGCGGCATGAACAGCGACAGCGCGCGCAAGGTGCCCGCCGATGCGCCAACCGCATTCA TCAAGCCGCGCTGGGCAAAGCTGGTTCTGACCGACGACGGCATCGACCGGCGTTACTACGAGTTATGCGCCCTGTCGGAG CTGAAGAACGCGCTGCGCTCCGGTGATGTCTGGGTGCAGGGTTCTCGCCAGTTCAAGGACTTCGACGAATACCTGGTGCC GGTCGAGAAGTTCGCCACTTTGAAGCTGGCCAGCGAATTGCCGCTGGCAGTGGCCACCGACTGCGACCAATACCTGCATG ACCGGTTGGAATTGTTGGAGGCGCAACTCGCCACAGTCAACCGCATGGCTGCGGCCAACGACTTACCGGATGCCATCATC ACCACCGCGTCAGGCCTGAAGATCACGCCGCTGGACGCGGCAGTACCAGACGCCGCGCAAGCCATGATCGACCAGACAGC TATGCTGCTGCCGCACCTCAAAATCACCGAGTTGCTGATGGAGGTCGATGAATGGACGGGCTTCACCCGCCACTTCACAC ACCTGAAGACCAGCGACACGGCCAAGGACAAAACCTTGCTGTTGACGACGATCCTGGCCGACGCGATCAACCTGGGTCTG ACCAAAATGGCCGAGTCCTGCCCTGGCACCACCTACGCCAAGCTGTCTTGGCTGCAAGCCTGGCACATCCGCGATGAAAC CTATTCGACGGCGCTGGCCGAGCTGGTGAATGCGCAGTTTCGGCAACCCTTCGCCGGCAACTGGGGTGACGGCACCACGT CATCGTCGGACGGCCAGAACTTCAGAACCGGCAGCAAAGCAGAAAGCACTGGTCATATCAACCCGAAGTATGGAAGCAGT CCAGGACGGACTTTCTACACCCATATCTCCGACCAGTACGCGCCCTTCAGTGCCAAGGTGGTCAACGTGGGCATTCGTGA TTCAACTTACGTGCTTGATGGCCTGCTGTACCACGAGTCGGACTTGCGCATCGAGGAACACTACACCGACACGGCAGGCT TCACCGATCACGTGTTTGGCTTGATGCATTTGCTGGGATTTCGCTTCGCGCCGCGTATCCGTGACTTGGGCGAAACCAAG CTATTCATCCCCAAGGGCGATGCCGCCTATGACGCGCTCAAGCCGATGATTAGCAGCGACAGGCTGAACATCAAGCAAAT ACGCGCCCATTGGGATGAAATTCTGCGGCTGGCCACCTCCATCAAGCAAGGCACGGTAACGGCTTCGCTGATGCTGCGCA AACTCGGCAGCTACCCGCGCCAGAACGGCTTGGCCGTGGCGTTGCGCGAGCTGGGGCGCATCGAGCGCACGCTGTTCATT TTGGATTGGCTGCAAAGCGTGGAGCTGCGCCGCCGCGTCCATGCGGGGCTGAATAAGGGCGAGGCGCGCAACGCGCTGGC CAGGGCGGTCTTCTTCTACCGATTGGGTGAAATCCGCGACCGCAGTTTTGAGCAGCAGCGCTACCGGGCCAGCGGCCTCA ATCTGGTGACGGCGGCCATCGTGTTGTGGAACACGGTATATCTGGAGCGTGCCACCAGTGCTTTGCGTGGCAACGGCACG GCGCTGGACGACACATTGTTGCAATATCTGTCGCCGCTGGGGTGGGAGCACATCAACCTGACCGGCGATTACCTATGGCG CAGCAGCGCCAAGGTCGGTGCGGGGAAGTTTAGGCCATTGCGACCGCTGCCACCGGCTTAG Protein sequence : MPVDEPPFPPLLRMVAAQLKMPVESWSEYGQREQTRREHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASA LVENLRRQSIILPAMNAIERASAEAITRANRRIYAALTDSLLSPHRQRLDELLKRKDGSKVTWLAWLRQSPAKPNSRHML EHIERLKSWQALDLPAGIERQVHQNRLLKIAREGGQMTPADLAKFEVQRRYATLVALAIEGMATVTDEIIDLHDRIIGKL FNAAKNKHQQQFQASGKAINDKVRMYGRIGQALIEAKQSGSDPFAAIEAVMPWDTFAASVTEAQTLARPADFDFLHHIGE SYATLRRYAPQFLGVLKLRAAPAAKGVLDAIDMLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDDGIDRRYYELCALSE LKNALRSGDVWVQGSRQFKDFDEYLVPVEKFATLKLASELPLAVATDCDQYLHDRLELLEAQLATVNRMAAANDLPDAII TTASGLKITPLDAAVPDAAQAMIDQTAMLLPHLKITELLMEVDEWTGFTRHFTHLKTSDTAKDKTLLLTTILADAINLGL TKMAESCPGTTYAKLSWLQAWHIRDETYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSS PGRTFYTHISDQYAPFSAKVVNVGIRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGETK LFIPKGDAAYDALKPMISSDRLNIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFI LDWLQSVELRRRVHAGLNKGEARNALARAVFFYRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRGNGT ALDDTLLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | ACF06153.1 | transposase | Not tested | Tn5036-like | Protein | 0.0 | 99 |
| EC042_4089 | YP_006098372.1 | transposase | Not tested | Tn2411 | Protein | 0.0 | 88 |
| tnpA | AAL08440.1 | transposase TnpA | Not tested | SRL | Protein | 0.0 | 86 |
| EXA24 | ABD94633.1 | truncated Tn1721 tranposase | Not tested | ExoU island A | Protein | 0.0 | 74 |
| tnpA | ACY75538.1 | TnpA | Not tested | Tn6060 | Protein | 0.0 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001921_24460 | YP_008258149.1 | transposase Tn21 | VFG1031 | Protein | 0.0 | 86 |
