Gene Information

Name : CFSAN001921_03975 (CFSAN001921_03975)
Accession : YP_008254194.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : lysine decarboxylase CadA
Function : -
COG functional category : -
COG ID : -
EC number : 4.1.1.18
Position : 814685 - 816829 bp
Length : 2145 bp
Strand : -
Note : constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAACGTTATTGCTATCATGAACCACATGGGCGTCTACTTTAAAGAAGAGCCTATTCGTGAACTGCATCGTGCACTGGA
AGGTTTAAATTTCCGTATCGTCTATCCAAACGACCGAGAAGACCTGCTGAAGCTGATTGAAAATAACTCCCGCCTTTGCG
GCGTCATTTTCGACTGGGATAAATATAACCTTGAGCTTTGCGAAGAGATTAGCAAGCTGAACGAGTATATGCCGCTGTAC
GCCTTCGCCAACAGCTACTCTACGCTGGACGTCAGCCTCAACGATCTGAGAATGCAGGTTCGCTTCTTTGAATATGCTTT
AGGCGCCGCAGCCGATATCGCGGCGAAAATTCGCCAGAATACCGATGAATACATCGACAATATTCTGCCGCCGCTGACAA
AAGCGCTGTTCAAATATGTGCGCGAAGGGAAATATACTTTCTGTACGCCTGGCCACATGGGCGGGACCGCTTTCCAGAAA
AGCCCCGTCGGCAGCATCTTTTATGATTTCTTCGGCCCGAACACGATGAAATCCGATATTTCGATTTCCGTTTCTGAACT
GGGTTCGCTGCTGGACCACTCCGGCCCGCATAAAGAAGCGGAAGAGTATATCGCCCGCGTCTTTAACGCCGAACGTAGCT
ACATGGTGACGAACGGCACCTCTACGGCGAACAAAATCGTCGGTATGTACTCCGCGCCGGCAGGCAGCACGGTACTGATT
GACCGTAACTGCCATAAATCGCTGACCCATCTGATGATGATGAGCGACATTACGCCGATTTATTTCCGCCCAACCCGTAA
CGCCTACGGTATTCTTGGCGGTATTCCGCAAAGCGAGTTCCAGCACGCCACTATCGCTAAACGGGTAAAAGAGACGCCTA
ACGCAACCTGGCCGGTCCATGCTGTTATTACTAACTCAACCTATGACGGTCTGTTGTATAACACTGACTACATCAAGAAA
ACTCTGGATGTGAAGTCCATTCATTTTGACTCCGCCTGGGTGCCTTATACCAATTTCTCCCCTATTTATCAGGGTAAATG
CGGTATGAGCGGCGACCGTGTGGAAGGCAAAATCATTTATGAAACCCAGTCCACGCATAAACTGCTGGCGGCGTTTTCAC
AGGCATCCATGATTCATGTTAAAGGCGACATTAACGAAGAAACCTTTAACGAAGCCTACATGATGCATACCACCACTTCT
CCGCACTACGGTATCGTAGCGTCTACTGAAACCGCAGCGGCGATGATGAAAGGTAATGCGGGTAAACGCCTGATTAACGG
CTCTATTGAACGTGCGATTAAATTCCGTAAAGAAATTAAACGCCTGAAAAGCGAATCTGACGGCTGGTTCTTTGACGTAT
GGCAGCCGGAACATATCGATGGAGCTGAGTGCTGGCCGCTGCGTTCAGATAGCGCATGGCATGGCTTCAAAAATATCGAT
AACGAACACATGTACCTCGACCCGATCAAAGTCACTATCCTGACGCCGGGGATGAAGAAAGACGGTACGATGGATGAGTT
CGGTATTCCGGCAAGTCTGGTCGCCAAATATCTCGATGAACGCGGCATCATCGTAGAAAAAACCGGTCCATACAACCTGC
TGTTCCTGTTCAGCATTGGTATCGACAAAACCAAAGCTCTGAGCCTGCTGCGCGCGCTCACTGAATTTAAACGCGCCTTT
GACCTGAACCTGCGCGTCAAAAACATTCTGCCGGCACTGTACCGCGAAGCGCCTGAGTTTTATGAAAATATGCGCATCCA
GGAACTGGCGCAGAATATTCATAAACTGGTCGAACATCATAATCTGCCGGACTTAATGTACCGTGCGTTTGAAGTGCTGC
CGAAAATGGTGATGACGCCGTATACTGCGTTCCAGAAAGAGCTGCATGGCGAAACGGAAGAGGTGTATCTTGAAGAGATG
GTTGGACGCGTCAACGCCAACATGATCCTTCCTTACCCTCCGGGAGTGCCGCTGGTGATGCCTGGTGAAATGATCACCGA
GGAAAGCCGTCCGGTACTGGAATTCCTGCAAATGCTGTGCGAAATCGGCGCCCACTATCCGGGCTTCGAAACCGATATCC
ACGGCGCCTATCGTCAGGCAGACGGACGTTACACCGTTAAGGTGCTGAAAGAAAATACGAAATAA

Protein sequence :
MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLKLIENNSRLCGVIFDWDKYNLELCEEISKLNEYMPLY
AFANSYSTLDVSLNDLRMQVRFFEYALGAAADIAAKIRQNTDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQK
SPVGSIFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDYIKK
TLDVKSIHFDSAWVPYTNFSPIYQGKCGMSGDRVEGKIIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTS
PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNID
NEHMYLDPIKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAF
DLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHHNLPDLMYRAFEVLPKMVMTPYTAFQKELHGETEEVYLEEM
VGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKENTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 93
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_03975 YP_008254194.1 lysine decarboxylase CadA VFG1670 Protein 0.0 68