Name : CFSAN001921_03570 (CFSAN001921_03570) Accession : YP_008254117.1 Strain : Salmonella enterica CFSAN001921 Genome accession: NC_021814 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : - COG ID : - EC number : - Position : 716830 - 718071 bp Length : 1242 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGGCAAGAAAAACCAAGCCGTTAACGGATACGGAAATCAAAGCAGCCAAATCTAAAGATGCCGATTATCAGTTGTATGA TGGTGACGGACTGACGCTGCTAATCAAATCCAGTGGCAGTAAGCTCTGGCAATTCCGTTATTACCGACCTCTGACAAAAC AGCGAACTAAACAGAGCTTCGGTTCCTATCCTGCTGTCTCGCTTTCCGATGCTCGTAAGCTCAGAGCTGAATCCAAAGTA TTACTGGCAAAAGGAATCGATCCTCAGGAATACCAAAAAGAACAGATAAGAAATTCTCAGGAGGCCAAAACCAACACTTT CTTGTTAGTTGCCGAGCGTTGGTGGAATGTGAAGAAAGCCAGTGTAACCGAGGACTATGCTGATGATATCTGGCGTTCGC TTGAAAGAGATATATTTCCCGCAATTGGCAACGTAAGCGTTACAGATATTAAAGCCCATACACTGGTTCAAGCCGTTCAA CCCGTTCAGGCCCGAGGAGCACTGGAAACTGTCCGCCGTCTTTGCCAACGGATCAATGAAGTCATGATTTATGCCCAAAA CACGGGCCTGATTGATGCAGTTCCCAGTGTTAATATTGGCAAAGCCTTCGAGAAACCTCAGAAAAAGAACATGCCCAGTA TTCGTCCGGATCAGTTGCCTCAGTTGATGCAAACTATGCGTACGGCCAGTATCAGCCTGTCTACGCGGTGTCTGTTCATG TGGCAACTTCTCACCATCACCCGCCCCGCAGAAGCCGCAGAAGCTCGGTGGAATGAGATCGATTTTGATGCTAACGAATG GAAAATTCCAGCAGCCCGAATGAAAATGAACCGGGACCATACCGTTCCATTATCTGATGGGGCTCTGGCTATTCTGGAAA TGATGAAGCCGCTCAGTGGTGGCCGAGATTTTATTTTTCCAAGCCGCATTAAGCCCACTCAGCCGATGAACAGTCAAACC GTGAATGCTGCACTCAAGCGTGCCGGTTTAGGGGGAGTGCTGGTTTCACATGGTTTGCGTTCTATCGCCAGTACAGCCCT CAATGAGCAAGGATTTCCTCCTGATGTCATTGAAGCCGCACTTGCTCATGTAGACAAAAATGAGGTACGTCGCGCTTATA ACCGCAGTGATTATCTTGAGCAACGTAGGCCGATGATGCAATGGTGGGCTGATTTTGTTAAAAGAGCAGATAAAGGAAGC ATGGTAGAATCTAGTGCCGGTGCATTAAAACTTGTTGTTTGA Protein sequence : MARKTKPLTDTEIKAAKSKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGSYPAVSLSDARKLRAESKV LLAKGIDPQEYQKEQIRNSQEAKTNTFLLVAERWWNVKKASVTEDYADDIWRSLERDIFPAIGNVSVTDIKAHTLVQAVQ PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM WQLLTITRPAEAAEARWNEIDFDANEWKIPAARMKMNRDHTVPLSDGALAILEMMKPLSGGRDFIFPSRIKPTQPMNSQT VNAALKRAGLGGVLVSHGLRSIASTALNEQGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVKRADKGS MVESSAGALKLVV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 1e-108 | 54 |
VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-108 | 54 |
VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-108 | 54 |
int | AAK20773.1 | integrase | Not tested | VPI | Protein | 1e-108 | 54 |
int | AAK20803.1 | integrase | Not tested | VPI | Protein | 1e-108 | 54 |
VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-107 | 52 |
VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 6e-85 | 46 |
VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 6e-85 | 46 |
VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-85 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
CFSAN001921_03570 | YP_008254117.1 | integrase | VFG1092 | Protein | 3e-85 | 46 |