Gene Information

Name : CFSAN001921_03475 (CFSAN001921_03475)
Accession : YP_008254098.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 698525 - 699343 bp
Length : 819 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCGACTCGCCAGCCGCTTTGGCCGTATCAATCAGATCCGCCGCGACCGCCCCTTAACCCATGAAGAATTAATGCAGGT
TGTTCCCAGCGTCTTCGGGGAAGGTAAGCACGTGTCCCGTTCAGACCATTACAGCTACATACCGACCATTACCCTGCTGG
AGAACCTGCAGCGTGAAGGATTCCAGCCGTTCTTTGCCTGCCAGACCCGCGTCAGGGACCAGAGCCGCCGTGAGCATACG
AAACATATGCTGCGCCTGCGTCGCGCCGGGCAGATAACCGGTCAGCAGGTGCCGGAAATTATCCTGCTCAATTCGCATGA
CGGTTCGTCCAGTTACCAGATGTTGCCGGGGTATTTCCGTGCCATCTGTACCAACGGTCTCGTCTGCGGGCAGTCATTTG
GCGAGGTGCGAGTGCCACACCGGGGAAATGTCGTGGAGAAAGTGATTGAAGGCGCTTACGAAGTCCTCGGTGTGTTCGAC
CGGGTGGAAGAGAAGCGTGATGCGATGCAGTCGCTTTTACTCCCGCCACCGGCACAACAGGCTTTTGCCAGAGCCGCGCT
GACGTACCGCTTCGGGGAAGAGCACCAGCCGGTGACGGAAGCGCAGATACTGACACCCCGCCGCTATGAAGACCGTCAGG
ATGACCTGTGGTCAGTTTTTAATCGGTGCCAGGAGAACCTGCTCAAAGGGGGGCTGCCAGGACGTACTGCCAAAGGCAAA
CGCAGCCATACCCGCGCGGTGAAAGGCATCGACGGCGACGTTAAGCTCAACCGGGCACTCTGGGTGATGGCAGAAAAACT
GCAGCAGGCTCTGAGCTGA

Protein sequence :
MRLASRFGRINQIRRDRPLTHEELMQVVPSVFGEGKHVSRSDHYSYIPTITLLENLQREGFQPFFACQTRVRDQSRREHT
KHMLRLRRAGQITGQQVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSFGEVRVPHRGNVVEKVIEGAYEVLGVFD
RVEEKRDAMQSLLLPPPAQQAFARAALTYRFGEEHQPVTEAQILTPRRYEDRQDDLWSVFNRCQENLLKGGLPGRTAKGK
RSHTRAVKGIDGDVKLNRALWVMAEKLQQALS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-97 81
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-97 81
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 9e-97 80
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 9e-96 79
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-96 79
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 2e-93 78
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 8e-93 78
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 2e-93 78
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-93 78
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 2e-93 78
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-93 78
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-93 78
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 8e-93 78
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-92 77
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-91 77
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 4e-73 59
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-73 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_03475 YP_008254098.1 hypothetical protein VFG1526 Protein 5e-97 80
CFSAN001921_03475 YP_008254098.1 hypothetical protein VFG1615 Protein 5e-96 79
CFSAN001921_03475 YP_008254098.1 hypothetical protein VFG0658 Protein 3e-93 78
CFSAN001921_03475 YP_008254098.1 hypothetical protein VFG1676 Protein 6e-92 77