Gene Information

Name : CFSAN001921_03470 (CFSAN001921_03470)
Accession : YP_008254097.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 697787 - 698257 bp
Length : 471 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACCGATAACACTCTGCCACTGTTCACACCCGCAGCAGATGCTCCTGCTGCGGCTCAGCATCAGATTATCGCTATACC
GGTAACCGATGAGAACCGCATCAGCTTCTGGCCGCAGCACTTTGGCAGCATTCCGCAGTGGATAATCCTTGAGCCGACCA
TCTTCGCGTGGATGGACCGCTTCTGCACGGACTACAGCGGCGGCATCTGGAATTTTTACACGCTGAGCAACGGCGGCGCG
TTTATGGCCCCGGAAGTGGAGAACTATGAACTCTGGTCGCTGTTTAACACGATGAACGGCAACGGCGGTGACATGAGTGC
CGAAGCTGCAGGGATTGCGGTCTGTCTGATGGCTTTCAGCCACCATGCCTGCCGTACCGAATGCGACGCCATGACGGAGC
ACTACTACCGCCTGCGGGACTACGCGCTCAACCACGCGGAATGCAACGCCATCATGCACATCATCGACTGA

Protein sequence :
MTDNTLPLFTPAADAPAAAQHQIIAIPVTDENRISFWPQHFGSIPQWIILEPTIFAWMDRFCTDYSGGIWNFYTLSNGGA
FMAPEVENYELWSLFNTMNGNGGDMSAEAAGIAVCLMAFSHHACRTECDAMTEHYYRLRDYALNHAECNAIMHIID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-45 74
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 2e-43 74
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 7e-43 73
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 7e-43 73
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 3e-44 73
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 3e-43 73
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 4e-45 73
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 3e-43 73
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 1e-45 73
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 6e-43 72
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-42 72
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 4e-44 72
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 4e-42 72
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-42 72
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-42 72
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 7e-44 71
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 6e-42 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_03470 YP_008254097.1 hypothetical protein VFG0659 Protein 2e-43 73
CFSAN001921_03470 YP_008254097.1 hypothetical protein VFG1677 Protein 6e-46 73
CFSAN001921_03470 YP_008254097.1 hypothetical protein VFG1527 Protein 2e-45 73
CFSAN001921_03470 YP_008254097.1 hypothetical protein VFG1616 Protein 3e-44 71