Gene Information

Name : CFSAN001921_03275 (CFSAN001921_03275)
Accession : YP_008254058.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 663258 - 664871 bp
Length : 1614 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGTCAGAAATACCTCATTCGGATCACTGAGCTGGAAAGGTTGCTCTCTGAGCAGGCTGAAGCCCTCCGTCAGAAAGA
CCAACAACTGAGTCTGGTTGAAGAGACGGAGGCCTTCCTGCGTTCTGCGCTGGCACGTGCCGAAGAAAAGATCGAAGAAG
ATGAGCGGGAAATAGAGCATCTGCGGGCCCAGGTGGAAAAACTGCGCCGGATGCTGTTCGGTACCCGTTCTGAAAAACTG
CGTCGTGAAGTTGAACAGGCTGAAGCCCTGCTGAAACGACGCGAACAGAACAGCGATCGTTACAGCGGGCGTGAGGATGA
CCCGCAGGTTCCCCGCCAGTTGCGACAGTCGCGTCATCGTCGCCCGTTACCGGCGCATCTGCCCCGCGAAATAAACCGCC
TGGAGCCAGAAGAAAGCTGTTGCCCGGAGTGTGGTGGTGAGCTGGATTATCTGGGGGAAGTCAGCGCAGAACAACTGGAA
CTGGTGAGCAGCGCCCTGAAAGTGATCCGCACAGAACGGGTAAAAAAAGCCTGTACAAAATGTGACTGCATCGTTGAAGC
ACCGGCACCGTCCCGTCCGATAGCGCGTGGTGTCGCGGGCCCGGGGTTACTTGCCCGCGTGTTAACGGGAAAATACTGCG
AACACCTGCCACTGTATCGTCAGAGTGAAATCTTTGCCCGTCAGGGTGTCGAACTGAGCCGTGCGTTACTCTCCAACTGG
GTTGACGCGTGCTGCCAGTTAATGACGCCGCTGAATGATGCCCTGTACCGTTACGTGATGAACACCCGCAAGGTTCACAC
TGATGACACACCAGTAAAAGTGCTGACACCGGGCAGGAAGAAGGCGAAAACAGGATATATCTGGACGTATGTCCGGGATG
ACAGGAATGCCGGTTCGCCAGAGCCTCCGGCGGTCTGGTTCGCCTACTCACCGGATCATCAGGGGAAACATCCGGAGCAG
CACCTTCGTCCCTTCCGGGGTATCCTGCAGGCAGATGCGTTTAATGGTTACGATCGGCTGTTCAGTGCCGGACGTGAAGG
CGGCGCGTTGACGGAAGCAGGATGCTGGGCTCATGCGCGACGCAAAATCCACGATGTATATATCAGTACCAAAAGCGCGA
CAGCGGAAGAAGCCCTGAAACTAATCGGTGAACTGTACGCCATCGAGCACGATATACGCGGGTTACCGGTGTCTGAACGC
CTGGCGGTCAGGCAAATGCAGAGTAGACCGCTCCTGACTTCCCTGTATAAGCTGATGCAGGAGAAAGAACACACGTTATC
GAAGAAATGTCGTCTGGGAGATGCGTTCCGGTATATCCGGAAGCACTGGGCTGCGTTGTGCAACTTCTGTGATGATGGCC
TGGCTGAGGTAGATAATAATGCCGCAGAAAGAGCGCTTCGTGCAGTCTGTCTCGGGAAGAAAAATTATGTGTTCTTCGGC
AGCGATCACGGTGGCGAGCGTGGAGCACTGTTGTACGGGCTGATCGGCACCTGCCGACTGAACGGTATAGATCCGGAAGC
GTATCTGCGCCATATCCTGGGTGTACTGCCGGAATGGCCTTCCAACCGTGTTGACGAGCTCCTGCCATGGAACGTAGCAC
TCACCAATAAATAA

Protein sequence :
MSQKYLIRITELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQVEKLRRMLFGTRSEKL
RREVEQAEALLKRREQNSDRYSGREDDPQVPRQLRQSRHRRPLPAHLPREINRLEPEESCCPECGGELDYLGEVSAEQLE
LVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIARGVAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNW
VDACCQLMTPLNDALYRYVMNTRKVHTDDTPVKVLTPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQ
HLRPFRGILQADAFNGYDRLFSAGREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHDIRGLPVSER
LAVRQMQSRPLLTSLYKLMQEKEHTLSKKCRLGDAFRYIRKHWAALCNFCDDGLAEVDNNAAERALRAVCLGKKNYVFFG
SDHGGERGALLYGLIGTCRLNGIDPEAYLRHILGVLPEWPSNRVDELLPWNVALTNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 0.0 90
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 0.0 90
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 0.0 90
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 3e-143 86
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-132 63
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 2e-137 63
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-137 63
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 2e-137 63
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 4e-138 63
tnp AEA34686.1 transposase Not tested Not named Protein 5e-138 63
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 4e-138 63
unnamed AAC31494.1 L0015 Not tested LEE Protein 3e-138 63
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 3e-138 63
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-137 63
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-137 63
unnamed AAL57570.1 unknown Not tested LEE Protein 3e-138 63
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 3e-106 54
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 1e-89 49
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 9e-90 49
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-98 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_03275 YP_008254058.1 transposase IS66 VFG1736 Protein 0.0 96
CFSAN001921_03275 YP_008254058.1 transposase IS66 VFG0793 Protein 2e-138 63