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Name : gabD (CFSAN001921_03125) Accession : YP_008254028.1 Strain : Salmonella enterica CFSAN001921 Genome accession: NC_021814 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 627596 - 629044 bp Length : 1449 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCAACTTAACGACTCTACCCTGTTCCGCCAGCAGGCCTTTATCGATGGCGACTGGCGCGACGCGCGCGGCGGCGATGT CATCCCCGTGAGCAACCCCGCCAACGGGAAACCGCTTGGCAATGTGCCCAAAATGGGGGCGGAAGAGACGCGCGACGCCA TCAACGCCGCCAATCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAGCGAGCCAATATCCTGCGTCGCTGGTTC AATCTGATGATGGAACATCAGGACGATTTGGCGCGTCTGATGACGCTGGAACAGGGTAAACCGCTGGCGGAAGCGAAAGG CGAAATTAGCTACGCCGCCTCGTTTATTGAATGGTTCGCCGAAGAGGGGAAGCGTATCTATGGCGACACGATTCCAGGCC ATCAGGCCGATAAACGGCTGCTGGTGATTAAACAGCCCATCGGCGTCACCGCCGCGATTACCCCGTGGAACTTTCCCTCG GCAATGATCACCCGTAAAGCCGGCCCCGCGCTGGCCGCAGGCTGCACAATGGTACTCAAACCCGCCAGCCAGACGCCGTT TTCCGCGCTGGCGCTGGCGGAACTGGCCCAGCGCGCCGGAATTCCCGCAGGCGTATTTAACGTCGTTACCGGTTCGGCAG GCGATATCGGCGGCGAGCTGACCAGCAACCCGCTGGTACGCAAACTGTCGTTTACCGGCTCGACGGAGATTGGCCGCCAG CTAATGGAACAATGCGCCAAAGACATTAAAAAAGTGTCGCTGGAATTGGGCGGCAATGCGCCGTTTATCGTCTTTGACGA TGCCGATCTGGATAAAGCCGTCGAAGGCGCGCTGGCTTCGAAGTTTCGCAACGCCGGGCAGACCTGTGTCTGCGCCAATA GATTGTATGTTCAGGACGGCGTTTACGATCGTTTTGCGGAAAAACTCAACCAGGCGGTAAATAAGCTCGCGGTCGGTGAC GGCCTGCAAGCCGACGTCGCTATCGGGCCGCTGATTGATGAAAAAGCCGTGGCGAAAGTCCAGGAACATATCGCCGATGC GCTGGAAAAAGGCGCCCGCGTCATTACGGGCGGTGAAGCGCACAAATTGGGCGGCAACTTCTTTCAACCGACCATTCTGG CGGATGTTCCTGATAACGCGAAAGTCGCCAAAGAAGAGACATTCGGGCCGCTCGCGCCTCTGTTCCGCTTCAGCGACGAG GCGGACGTCATCAGGCAGGCTAACGATACCGAGTTCGGCCTGGCAGCCTATTTTTATGCACGCGATTTAAGCCGCGTTTT CCGCGTCGGCGAAGCGCTGGAATACGGCATCGTCGGTATTAATACCGGCATTATCTCCAACGAAGTCGCGCCTTTCGGCG GCATTAAGGCCTCCGGATTAGGCCGAGAAGGTTCCAAATACGGCATCGAAGATTATTTAGAAATCAAATATATGTGCATC GGCCTTTAA Protein sequence : MQLNDSTLFRQQAFIDGDWRDARGGDVIPVSNPANGKPLGNVPKMGAEETRDAINAANRALPAWRALTAKERANILRRWF NLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAQRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLNQAVNKLAVGD GLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDE ADVIRQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-160 | 67 |
