Gene Information

Name : CFSAN001921_02680 (CFSAN001921_02680)
Accession : YP_008253944.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : chaperone protein SicP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 545094 - 545486 bp
Length : 393 bp
Strand : +
Note : type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
TTGCAAGCACACCAGGATATTATCGCTAATATTGGTGAGAAATTGGGTTTACCGCTCACTTTTGACGACAACAATCAGTG
CTTATTATTACTCGATAGCGATATTTTTACGTCTATTGAAGCTAAAGATGATATCTGGTTATTGAACGGTATGATTATAC
CGTTATCGCCTGTTTGTGGCGATTCTATCTGGCGGCAGATTATGGTGATTAATGGTGAACTGGCTGCGAATAATGAAGGT
ACGTTAGCGTATATTGATGCCGCAGAGACGTTGTTGCTTATACATGCAATTACCGATCTGACAAATACTTACCATATTAT
ATCGCAGCTTGAGTCATTTGTGAATCAGCAGGAAGCGCTCAAAAACATACTGCAGGAATATGCTAAAGTATGA

Protein sequence :
MQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEG
TLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicP NP_461800.1 secretion chaperone Virulence SPI-1 Protein 3e-54 100
sicP YP_217798.1 virulence associated chaperone Virulence SPI-1 Protein 3e-47 99
sicP NP_457273.1 chaperone (associated with virulence) Virulence SPI-1 Protein 2e-46 97
sicP NP_806482.1 chaperone Virulence SPI-1 Protein 2e-46 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_02680 YP_008253944.1 chaperone protein SicP VFG0541 Protein 7e-55 100