Gene Information

Name : CFSAN001921_02655 (CFSAN001921_02655)
Accession : YP_008253939.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : pathogenicity island 1 effector protein SipC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 540089 - 541318 bp
Length : 1230 bp
Strand : +
Note : cell invasion protein C; required for entry of the bacteria into the host cell; binds to actin; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTAATTAGTAATGTGGGAATAAATCCCGCCGCTTATTTAAATAATCATTCTGTTGAGAATAGTTCACAGACAGCTTC
GCAATCCGTTAGCGCTAAAGATATTCTGAATAGTATTGGTATTAGCAGCAGTAAAGTCAGTGACCTGGGGTTGAGTCCTA
CACTGAGCGCGCCTGCGCCAGGGGTATTAACGCAAACCCCCGGAACGATCACGTCCTTTTTAAAAGCCAGTATTCAAAAT
ACCGACATGAATCAGGATTTGAATGCTCTGGCAAATAATGTCACGACTAAAGCGAATGAGGTTGTGCAAACCCAGTTACG
CGAGCAGCAGGCAGAAGTCGGAAAGTTTTTTGATATTAGCGGAATGTCTTCCAGTGCCGTTGCGCTGTTGGCTGCCGCGA
ATACGTTAATGCTGACGTTGAACCAGGCTGATAGCAAACTGTCTGGTAAGTTGTCATTAGTCAGTTTTGATGCAGCTAAA
ACGACGGCAAGCTCCATGATGCGCGAAGGGATGAATGCGTTGTCCGGTAGTATTTCCCAGAGCGCGCTTCAGTTGGGGAT
CACTGGCGTGGGCGCCAAACTGGAATATAAGGGGCTGCAGAATGAAAGAGGCGCGCTTAAACATAATGCCGCGAAGATCG
ATAAACTGACCACTGAAAGCCACAGTATTAAAAACGTGCTGAACGGGCAGAATAGCGTCAAACTCGGTGCTGAAGGCGTC
GATTCTCTGAAATCGTTAAATATGAAGAAAACCGGTACCGATGCGACGAAAAATCTTAATGATGCGACGCTTAAATCTAA
TGCCGGAACCAGCGCCACGGAAAGTCTGGGTATTAAAGACAGTAATAAACAAATCTCCCCTGAACATCAGGCTATTCTGT
CGAAACGTCTTGAGTCTGTCGAATCCGATATTCGTCTTGAGCAGAATACCATGGATATGACCCGAATCGATGCGCGCAAG
ATGCAGATGACGGGCGATCTGATTATGAAGAACTCGGTCACGGTCGGTGGTATTGCAGGGGCGTCCGGGCAGTACGCCGC
TACTCAGGAACGTTCCGAGCAGCAAATTAGCCAGGTGAATAACCGGGTTGCCAGCACCGCATCGGACGAAGCCCGTGAAA
GTTCACGTAAATCGACCAGCCTGATTCAGGAAATGCTGAAAACAATGGAGAGCATTAACCAGTCGAAAGCATCCGCACTC
GCTGCTATCGCAGGCAATATTCGCGCTTAA

Protein sequence :
MLISNVGINPAAYLNNHSVENSSQTASQSVSAKDILNSIGISSSKVSDLGLSPTLSAPAPGVLTQTPGTITSFLKASIQN
TDMNQDLNALANNVTTKANEVVQTQLREQQAEVGKFFDISGMSSSAVALLAAANTLMLTLNQADSKLSGKLSLVSFDAAK
TTASSMMREGMNALSGSISQSALQLGITGVGAKLEYKGLQNERGALKHNAAKIDKLTTESHSIKNVLNGQNSVKLGAEGV
DSLKSLNMKKTGTDATKNLNDATLKSNAGTSATESLGIKDSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARK
MQMTGDLIMKNSVTVGGIAGASGQYAATQERSEQQISQVNNRVASTASDEARESSRKSTSLIQEMLKTMESINQSKASAL
AAIAGNIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipC YP_217803.1 cell invasion protein Virulence SPI-1 Protein 7e-174 100
sipC NP_461805.1 translocation machinery component Virulence SPI-1 Protein 7e-174 100
sipC NP_457278.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-172 99
sipC NP_806487.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-172 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_02655 YP_008253939.1 pathogenicity island 1 effector protein SipC VFG0545 Protein 3e-174 100