|
Name : CFSAN001921_02620 (CFSAN001921_02620) Accession : YP_008253932.1 Strain : Salmonella enterica CFSAN001921 Genome accession: NC_021814 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaO Function : - COG functional category : - COG ID : - EC number : - Position : 533929 - 534840 bp Length : 912 bp Strand : + Note : involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCG GGAAGCGACGCTGGAATATCCGACGCGACAGGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCCTGGA TTAAACCTGGGGACTGGCTTGAGCATGTCTCTCCCGCTCTGGCTGGGGCGGCGGTTTCTGCTGGCGCTGAGCACCTGGTC GTTCCCTGGCTTGCTGCAACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA CCCCGTACCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAGCATC TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT ACGCAGCGTTCGTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAATCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT AAGAACGTTACCCTCGCCGAACTCGAAGCCATGGGGCAGCAACAGCTATTATCACTGCCGACCAATGCTGAACTTAACGT TGAAATTATGGCGAATGGTGTTTTGCTGGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG AATGGCTGAGCGAGTCTGGTAATGGGGAATGA Protein sequence : MSLRVRQIDRREWLLAQTATECQRHGREATLEYPTRQGMWVRLSDAEKRWSAWIKPGDWLEHVSPALAGAAVSAGAEHLV VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKMLRWPLRFVIGSSD TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR KNVTLAELEAMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaO | NP_461812.1 | surface presentation of antigens protein SpaO | Virulence | SPI-1 | Protein | 5e-128 | 100 |
| spaO | YP_217810.1 | surface presentation of antigens protein SpaO | Virulence | SPI-1 | Protein | 5e-126 | 99 |
| spaO | NP_457285.1 | surface presentation of antigens protein (associated with type III secretion and virulence) | Virulence | SPI-1 | Protein | 2e-127 | 99 |
| spaO | NP_806494.1 | surface presentation of antigens protein SpaO | Virulence | SPI-1 | Protein | 2e-127 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001921_02620 | YP_008253932.1 | type III secretion system protein SpaO | VFG0552 | Protein | 2e-128 | 100 |
