Gene Information

Name : CFSAN001921_21640 (CFSAN001921_21640)
Accession : YP_008257626.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4466201 - 4466680 bp
Length : 480 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAATAATCGTCGTGGTTTAACCGCCGTCCTGGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAA
TCCGGGAAATGGTAATGGCGGCGGACATGGTAATAACGCGGCTAATCAGGGTAATAACGGTAACGGACATAAAGGAAATG
CCGGGCAAAAAACGGAACACCGTAAAAATGGCGGTAAACCGGATCACGTCGAGTCGGACATTAGCTATGCTGTCGCCAGG
CAACTGGCAGTGAATTTAGGGCTGACGGGTTATCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACC
GCTACCGCCGGGAATCGCTAAAAAAACGGTGCCGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGA
AAATCGTTGGGGATAATCTGGTGCTGATCGCGCTCAGTACCGCGGTGGTCACGGCGATTATTAATGGCGTATTTGATTAA

Protein sequence :
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVAR
QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 1e-50 100
cigR AAD16958.1 CigR Virulence SPI-3 Protein 9e-51 100
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 1e-49 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_21640 YP_008257626.1 membrane protein VFG0573 Protein 4e-51 100