|
Name : CFSAN001921_19645 (CFSAN001921_19645) Accession : YP_008257254.1 Strain : Salmonella enterica CFSAN001921 Genome accession: NC_021814 Putative virulence/resistance : Virulence Product : NleB Function : - COG functional category : - COG ID : - EC number : - Position : 4051260 - 4052288 bp Length : 1029 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGAGCATTTAATTGTTATGATCCCACCATTAAATAGATATGTTCCCGCGCTTTCAAAAAATGAATTGGTTAAAACTGT TACCAACAGGGACATTCAGTTTACAAGTTTTAATGGAAAAGATTATCCCTTGTGCTTTTTAGATGAGAAAACCCCTCTTC TTTTCCAGTGGTTTGAGCGGAATCCTGCTCGCTTTGGGAAAAATGATATACCTATAATTAACACAGAGAAAAACCCCTAC CTTAACAATATCATTAAAGCAGCAACAATTGAAAAAGAACGTCTTATAGGTATTTTTGTAGATGGTGATTTTTTTCCGGG ACAAAAGGATGCTTTTTCAAAACTTGAGTATGACTATGAAAACATAAAAGTCATATATAGAAATGATATTGACTTTAGTA TGTACGATAAAAAATTATCAGAAATTTATATGGAAAATATTTCTAAGCAAGAGTCCATGCCAGAAGAAAAAAGGGATTGT CATTTACTGCAGCTATTGAAAAAAGAATTGAGTGATATTCAAGAGGGTAATGATTCATTAATTAAATCTTACTTACTGGA TAAAGGCCATGGATGGTTTGATTTTTACAGGAATATGGCTATGTTAAAGGCTGGTCAGTTATTTTTGGAGGCGGATAAGG TTGGGTGTTATGATTTATCAACAAATAGTGGGTGTATATATCTTGATGCTGATATGATTATCACGGAAAAACTGGGGGGT ATATATATTCCGGATGGAATCGCTGTTCATGTAGAAAGGATAGATGGCCGTGCTTCTATGGAAAACGGGATAATAGCTGT TGATCGCAATAACCACCCGGCTTTACTTGCTGGATTAGAAATAATGCATACTAAATTTGATGCTGATCCCTATTCTGATG GTGTATGTAATGGAATTAGAAAACATTTTAATTATTCTTTAAATGAAGATTATAATTCTTTTTGCGATTTTATTGAGTTT AAGCATGATAACATTATAATGAATACCAGTCAGTTTACGCAAAGTTCATGGGCGAGGCATGTGCAGTAG Protein sequence : MEHLIVMIPPLNRYVPALSKNELVKTVTNRDIQFTSFNGKDYPLCFLDEKTPLLFQWFERNPARFGKNDIPIINTEKNPY LNNIIKAATIEKERLIGIFVDGDFFPGQKDAFSKLEYDYENIKVIYRNDIDFSMYDKKLSEIYMENISKQESMPEEKRDC HLLQLLKKELSDIQEGNDSLIKSYLLDKGHGWFDFYRNMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIITEKLGG IYIPDGIAVHVERIDGRASMENGIIAVDRNNHPALLAGLEIMHTKFDADPYSDGVCNGIRKHFNYSLNEDYNSFCDFIEF KHDNIIMNTSQFTQSSWARHVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| st48 | CAC81886.1 | ST48 protein | Not tested | LEE II | Protein | 3e-94 | 64 |
| unnamed | CAI43815.1 | hypothetical protein | Not tested | LEE | Protein | 3e-94 | 64 |
| Z4328 | NP_289553.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-93 | 64 |
| ECO26_5294 | YP_003232174.1 | T3SS effector NleB | Virulence | LEE | Protein | 4e-94 | 64 |
| unnamed | AAL57565.1 | unknown | Not tested | LEE | Protein | 3e-94 | 64 |
| nleB1 | YP_003223426.1 | T3SS effector NleB | Virulence | LEE | Protein | 3e-94 | 62 |
| ECO111_3725 | YP_003236064.1 | T3SS secreted effector NleB | Virulence | LEE | Protein | 4e-93 | 61 |
