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Name : CFSAN001921_16420 (CFSAN001921_16420) Accession : YP_008256623.1 Strain : Salmonella enterica CFSAN001921 Genome accession: NC_021814 Putative virulence/resistance : Virulence Product : fimbrial chaperone protein StdC Function : - COG functional category : - COG ID : - EC number : - Position : 3332842 - 3333492 bp Length : 651 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : GTGTTTCGCGGCGAAGATAAATCGATAAGCGTCGATCTGAAAAACGCCAACAGCAAACTGCCCTATCTGGCGCAGTCCTG GGTGGAAGATGAGAAGGGCGTCAAAATCACCTCGCCTTTAATCGTCGTCCCACCGGTCCAGCGCATTGAGCCGTCGGCAA TCGGACAGGTCAAAATTCAGGGGATGCCGGCGCTGGCGTCGCTCCCCCAGGATCGGGAAACCCTTTTTTATTACAACGTG CGCGAAATTCCGCCGCAAAGCGACAAGCCCAATACGCTGCAAATCGCCCTGCAAACGCGCATCAAAGTTTTTTACCGCCC GCAGGCGCTATCGAAAATCGATATGCAGCATCCCTGGCAATACAAGATCACCCTTCAGCGTCAGGGCAATGGCTATCAGG TGAGCAACACAACCGGCTACTACGTGGTGTTAAGCAACGCCAGCAACCGCATGGACGGCACACCAGCCAGAGGCTTTAGC CCTTTAGTGATTGCACCAAAAAGCAACGTGACGCTGGGAGGGGACGCCAGTGAATTAGGTCACTCGCCTGTGCTGACTTA CGTCAACGATTATGGCGCGCGGTTACCGCTGATTTTTAACTGTACTGACAACAGTTGTGCGGTAGATGAAGCAAAAAGCA GAAAGTCGTAA Protein sequence : MFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVVPPVQRIEPSAIGQVKIQGMPALASLPQDRETLFYYNV REIPPQSDKPNTLQIALQTRIKVFYRPQALSKIDMQHPWQYKITLQRQGNGYQVSNTTGYYVVLSNASNRMDGTPARGFS PLVIAPKSNVTLGGDASELGHSPVLTYVNDYGARLPLIFNCTDNSCAVDEAKSRKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 2e-45 | 44 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 3e-45 | 44 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-45 | 44 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 4e-46 | 44 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-42 | 43 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 5e-45 | 43 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 5e-45 | 43 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 3e-45 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001921_16420 | YP_008256623.1 | fimbrial chaperone protein StdC | VFG1547 | Protein | 9e-46 | 44 |
| CFSAN001921_16420 | YP_008256623.1 | fimbrial chaperone protein StdC | VFG0885 | Protein | 5e-43 | 43 |
| CFSAN001921_16420 | YP_008256623.1 | fimbrial chaperone protein StdC | VFG0896 | Protein | 2e-45 | 43 |
