Gene Information

Name : CFSAN001921_12875 (CFSAN001921_12875)
Accession : YP_008255941.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Resistance
Product : histidine ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2624036 - 2624758 bp
Length : 723 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGATTGAATTTAAAAACGTCTCCAAGCACTTTGGCCCCACCCAGGTGCTACATAACATTGATTTAAACATCCGTCAGGG
CGAAGTGGTTGTGATTATCGGCCCTTCCGGTTCGGGTAAATCCACGTTATTACGCTGTATCAATAAACTGGAAGAGATCA
CCTCCGGCGATCTGATTGTCGATGGTCTGAAAGTCAACGATCCTAAAGTAGACGAACGGCTGATTCGCCAGGAAGCCGGC
ATGGTGTTTCAACAGTTTTATCTGTTCCCGCATCTGACCGCGCTCGAAAACGTGATGTTCGGTCCTCTGCGCGTGCGCGG
CGTAAAGAAAGAAGAAGCGGAAAAACAGGCGAAAGCTCTGTTAGCGAAAGTTGGACTGGCGGAACGGGCGCACCACTACC
CCTCCGAGCTTTCCGGCGGTCAACAACAGCGCGTCGCCATTGCCCGAGCGCTGGCCGTGAAGCCGAAAATGATGCTCTTT
GACGAGCCAACCTCCGCTCTGGACCCTGAACTGCGCCATGAAGTGCTGAAAGTCATGCAGGATCTGGCGGAAGAAGGCAT
GACCATGGTCATTGTCACTCACGAAATCGGCTTTGCCGAAAAAGTCGCCTCACGGCTGATTTTTATCGATAAAGGCCGTA
TTGCCGAAGATGGCAGTCCGCAGGCGTTGATCGAAAACCCGCCAAGCCCACGTTTACAGGAATTTTTACAGCACGTCTCC
TGA

Protein sequence :
MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAG
MVFQQFYLFPHLTALENVMFGPLRVRGVKKEEAEKQAKALLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGSPQALIENPPSPRLQEFLQHVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-26 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-25 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_12875 YP_008255941.1 histidine ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-32 45