Gene Information

Name : CFSAN001921_10200 (CFSAN001921_10200)
Accession : YP_008255413.1
Strain : Salmonella enterica CFSAN001921
Genome accession: NC_021814
Putative virulence/resistance : Virulence
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2082956 - 2083684 bp
Length : 729 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCGTATTCTATCGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGACATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATTCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGCCAGGTCAAACCCTTACTGTCGCGTCCGGTTATTCGCCTGGGCGATAACTGG
ATAACGATCCAGGAGACGATGCTTCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCCCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCATCTTCCCGCCG
TGATGACGCTGCGCGAAATACTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCCTTTATTAGCGGATGGAATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCGCCCCCAGTTGTGCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGAAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAG

Protein sequence : 
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWNLSDHCEIWLEALTRTGQELRLNVLPSPPVVLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 3e-111 99
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 2e-111 99
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 5e-111 99
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 5e-111 99
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 7e-110 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001921_10200 YP_008255413.1 MerR family transcriptional regulator VFG0491 Protein 1e-111 99