|
Name : CFSAN001921_10090 (CFSAN001921_10090) Accession : YP_008255392.1 Strain : Salmonella enterica CFSAN001921 Genome accession: NC_021814 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaK Function : - COG functional category : - COG ID : - EC number : - Position : 2066681 - 2067355 bp Length : 675 bp Strand : - Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAC ATTACAATTAACTTTATTTGCGCAAGAGCAACAAGCTAAGAGAGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGCTTGCGT AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACATTTACAAGACGATGAAAATCAATTTCG TTCATTGGTCGATCACGCAGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT CCTGAAAAAGAGGCATTGATGCGAGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA GGCTGAACTTTCCTCAACACGATATGCCGTTGAATTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA Protein sequence : MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLR KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaK | NP_460376.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 3e-102 | 100 |
| ssaK | CAA70533.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-101 | 100 |
| STY1709 | NP_456117.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 9e-100 | 99 |
| t1279 | NP_805082.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 9e-100 | 99 |
| ssaK | YP_216419.1 | secretion system apparatus protein SsaK | Virulence | SPI-2 | Protein | 6e-99 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001921_10090 | YP_008255392.1 | type III secretion system protein SsaK | VFG0511 | Protein | 1e-102 | 100 |
