Gene Information

Name : CFSAN002069_23240 (CFSAN002069_23240)
Accession : YP_008253351.1
Strain :
Genome accession: NC_021813
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 44563 - 45048 bp
Length : 486 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTCGGAGCAGGAACTTGATGCCTGCCTTTACGGACAATTTTCCACGGTACCAGTCGTACGTCCTGAAAGCACCGTTAT
ATCCGAAGCCCCCGTGGTAAAAAAACGTCCCCGGCGGCCCAACTTCCCTTATGAGTTTAAAATCGCCTTAGTGGAGCAGT
CACTGCAGCCCGGAGCCTGTGTGGCGCAGATCGCCCGGGAAAACGGAATCAACGATAACCTGCTCTTCAACTGGCGCCAT
CAATACCGGAAAGGTGGCCTGCTGCCTTCCGGAAAAAATATGCCGGCACTGCTTCCCGTGACGTTAACGCCGGAGCCGGA
TAATAAAATCCCGGCCCCCGCACAGGAACCAGAGCAGATAAATACACCGTCCGACAGTCTGTGTTGTGAGCTGGTTCTGC
CGGCCGGAACTCTCAGGCTTAAAGGTAAACTGACGCCGGCGTTATTACAGACACTTATCCGCGAAATAAAAGGGAGCAGC
CACTGA

Protein sequence :
MSEQELDACLYGQFSTVPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRH
QYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREIKGSS
H

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ADD91738.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-72 100
aec51 AAW51734.1 Aec51 Not tested AGI-3 Protein 3e-72 100
unnamed ACU09437.1 IS66 family element orf1 Not tested LEE Protein 1e-17 45
l0013 CAD33777.1 L0013 protein Not tested PAI I 536 Protein 1e-17 45
unnamed AAL99257.1 unknown Not tested LEE Protein 1e-17 45
c3560 NP_755435.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-22 45
ECUMN_3326 YP_002414006.1 putative transposase Not tested Not named Protein 8e-22 45
ECs4545 NP_312572.1 hypothetical protein Not tested LEE Protein 1e-17 45
unnamed AAC31492.1 L0013 Not tested LEE Protein 8e-18 45
unnamed AAL08462.1 unknown Not tested SRL Protein 2e-17 45
c3577 NP_755452.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-17 45
Z5096 NP_290247.1 prophage-associated protein Not tested LEE Protein 1e-17 45
Z4315 NP_289541.1 hypothetical protein Not tested OI-122 Protein 3e-20 42
ECO103_3552 YP_003223419.1 hypothetical protein Not tested LEE Protein 1e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_23240 YP_008253351.1 transposase VFG1518 Protein 5e-18 45
CFSAN002069_23240 YP_008253351.1 transposase VFG1697 Protein 2e-22 45
CFSAN002069_23240 YP_008253351.1 transposase VFG1708 Protein 3e-18 45
CFSAN002069_23240 YP_008253351.1 transposase VFG1053 Protein 6e-18 45
CFSAN002069_23240 YP_008253351.1 transposase VFG0791 Protein 3e-18 45