Gene Information

Name : CFSAN002069_01990 (CFSAN002069_01990)
Accession : YP_008249258.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 402872 - 403288 bp
Length : 417 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGTGCAAGAAATAGAGCAATGGTTGCGTCGGCATCAGGTGTTTACTGAGCCTGCATATTTAGGGGAGACCGCCATATT
ACTTGGGCAGCAGTTTATATTATCGCCTTACCTGGTGATCTATCGTATTGAGGCAAAAGAAATGATTATTTGTGAGTTTA
GACGCCTGACGCCCGGGCAACCTCGACCACAGCAATTGTTTCACTTACTGGGACTTTTACGCGGGATATTTGTGCATCAC
CCGCAGTTAACATGTTTAAAGATGTTGATAATCACCGACGTTCTGGATGAAAAAAAAGCCATGCTACGCAGGAAATTATT
GCGCATCCTGACAGTAATGGGAGCGACCTTTACACAGCTTGATGGCGATAACTGGACAGTTTTATCCGCCGAGCATCTTA
TCCAGCGACGTTTTTAA

Protein sequence : 
MVQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIEAKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHH
PQLTCLKMLIITDVLDEKKAMLRRKLLRILTVMGATFTQLDGDNWTVLSAEHLIQRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 8e-63 100
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 8e-63 100
sseE AAC28883.1 SseE Virulence SPI-2 Protein 5e-63 100
sseE CAA12189.1 SseE Virulence SPI-2 Protein 5e-63 100
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 99
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_01990 YP_008249258.1 pathogenicity island 2 effector protein SseE VFG0503 Protein 2e-63 100