Gene Information

Name : CFSAN002069_01985 (CFSAN002069_01985)
Accession : YP_008249257.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone protein SscB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 402386 - 402820 bp
Length : 435 bp
Strand : -
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; chaperone for SseF; required for the efficient replication of Salmonella in host macrophages; Derived b

DNA sequence :
ATGATGATGAAAGAAGATCAGAAAAATAAAATACCCGAAGACATTCTGAAACAGCTATTATCCGTTGATCCGGAAACCGT
TTATGCCAGTGGTTACGCCTCATGGCAGGAGGGGGATTATTCGCGCGCCGTAATCGATTTTAGTTGGCTGGTGATGGCCC
AGCCATGGAGTTGGCGTGCCCATATTGCATTGGCTGGCACCTGGATGATGCTTAAAGAATACACGACGGCCATTAATTTC
TATGGACATGCCTTGATGCTGGATGCCAGCCATCCAGAACCGGTTTACCAAACGGGCGTCTGTCTCAAAATGATGGGGGA
ACCCGGGTTGGCGAGAGAGGCTTTTCAAACCGCAATCAAGATGAGTTATGCGGATGCCTCATGGAGTGAGATTCGCCAGA
ATGCGCAAATAATGGTTGATACTCTTATTGCTTAA

Protein sequence :
MMMKEDQKNKIPEDILKQLLSVDPETVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINF
YGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1424 YP_216411.1 secretion system chaperone protein SscB Virulence SPI-2 Protein 5e-63 100
sscB NP_460368.1 secretion system chaperone Virulence SPI-2 Protein 5e-63 100
sscB AAC28884.1 SscB Virulence SPI-2 Protein 4e-63 100
sscB CAA12190.1 SscB Virulence SPI-2 Protein 4e-63 100
sscB NP_456125.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-62 99
sscB NP_805074.1 pathogenicity island protein Virulence SPI-2 Protein 2e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_01985 YP_008249257.1 type III secretion system chaperone protein SscB VFG0504 Protein 2e-63 100