Gene Information

Name : CFSAN002069_01980 (CFSAN002069_01980)
Accession : YP_008249256.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 401588 - 402370 bp
Length : 783 bp
Strand : -
Note : with SseG is involved in the aggregation of the host endosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGT
ATCGTTTCCTCCCCCTGAAATTCCAGCGCCTGGCACCCCCGCAGCCCCTGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAGGGATTATGCTATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGGTTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATTGATATGTCAGCAAAAGGAGCCGTTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGTGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTTATTAATA
CGTTCAGGAATCGCTATTTCTATGTTGGTTTTACCCCTACAGTTTCCACTGCCCGCCGCTGAAAATATAGCGGCCTCTTT
GGATATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCTTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTCATGCCGATCCCAGTGCGTTATTGGCGGAACAAATGGCAGCGCTCTGT
CAATCTGCTACTGCACCTGCATTAATGGACAGTTCTGGTCATACATCTCGGGGAGAACCATGA

Protein sequence :
MKIHIPSAASNIVDGNSPPSDIQAKEVSFPPPEIPAPGTPAAPVLLTPEQIRQQRDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQLICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
RSGIAISMLVLPLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCFARPSGDDQENSVDELHADPSALLAEQMAALC
QSATAPALMDSSGHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 2e-89 99
sseF AAC28885.1 SseF Virulence SPI-2 Protein 2e-89 99
sseF CAA12191.1 SseF Virulence SPI-2 Protein 3e-88 98
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 2e-86 97
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 2e-88 97
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 2e-88 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_01980 YP_008249256.1 pathogenicity island 2 effector protein SseF VFG0505 Protein 9e-90 99