Gene Information

Name : CFSAN002069_01940 (CFSAN002069_01940)
Accession : YP_008249248.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 397100 - 398116 bp
Length : 1017 bp
Strand : -
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; may be involved in regulation; Derived by automated computational analysis using gene prediction method

DNA sequence :
ATGGTGAAGATAAAAGAGGTCGCGATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGG
CCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGC
TCTATGAGACGATGGAAGAAATAGGAATGGCGCTGAGTGGTAAACTGCGCGAAAATTATAAATTCACTGATGCTGAGAAA
CTGGAGCGCAGACAGCAGGCTTTGCTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTAC
CGAAGAGAATAGTGATCCTGATTTACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGT
CAAAAAAGAAAAAACGCGATTTGCAATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGT
TTACTGGAACTTGGCGAAGTGGATACCGCTACGCTGTCCTCTCTGAAACGTTTTATGCAACAGGCGATAGACAACGATGA
AATGCCCTTATCGCAGTGGTTCAGACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCCA
TAGCCTTTGAACTTAGCATATGCATCGAACCTTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTG
CTGTTATTCCTTGGCCTTGAAAAAGAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCT
ACTACTCGATATCATTTGTGAGCGCTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGA
AGATGTTCAATCGGTTACTCCAACAACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAA
CGTGAACAAATTCTCGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Protein sequence :
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEK
LERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRL
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQ
REQILETLREVKINQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 2e-134 99
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-135 99
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 2e-135 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 4e-128 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 4e-128 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_01940 YP_008249248.1 type III secretion system protein SsaL VFG0512 Protein 1e-135 99