Gene Information

Name : spaN (CFSAN002069_17810)
Accession : YP_008252322.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : antigen presentation protein SpaN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3710918 - 3711928 bp
Length : 1011 bp
Strand : +
Note : involved in the surface presentation of antigens needed for the invasion of Salmonella into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGGCGATGTGTCAGCTGTCTGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGC
ATTAAAAAAAGCGGTGGAAAAACATAAGACAGAATATTCCGGTGATAAAAAAGATCGCGACTATGGCGATGCTTTCGTAA
TGCATAAAGAAACGGCTTTACCGGTATTACTGGCGGCATGGCGACATGGCGCGCCAGCGAAATCAGAACATCACAATGGC
AACGTTTCTGGTCTGCATCATAACGGAAAAGGCGAACTCAGGATTGCTGAAAAACTGTTGAAAGTCACTGCTGAAAAATC
TGTCGGTTTGATCTCTGCGGAGGCCAAAGTAGATAAATCCGCAGCGTTGCTATCGCCTAAAAATAGGCCGTTAGAAAGCG
TAAGCGGTAAAAAATTATCTGCTGATTTAAAAGCTGTGGAATCCGTTAGTGAAGTAACCGATAACGCCACGGGAATCTCT
GACGATAATATCAAGGCATTGCCTGGGGATAATAAAGCCATCGCGGGCGAAGGCGTTCGTAAAGAGGGCGCGCCGCTGGC
GCGGGATGTCGCACCTGCCCGAATGGCCGCAGCCAATACCGGTAAGCCTGAAGATAAAGATCATAAAAAGGTTAAAGATG
TTTCTCAGCTTCCGCTGCAACCAACCACTATCGCCGATCTTAGCCAATTAACCGGCGGCGATGAAAAAATGCCTTTAGCG
GCGCAATCAAAGCCGATGATGACTATTTTTCCCACTGCCGATGGCGTGAAAGGAGAGGATAGCTCGCTGACTTACCGTTT
TCAGCGCTGGGGAAATGACTATTCCGTCAATATTCAGGCGCGGCAAGCAGGGGAGTTTTCGTTAATACCGTCAAATACGC
AGGTTGAACATCGTTTGCATGATCAATGGCAAAACGGTAATCCCCAGCGCTGGCACCTGACGCGAGACGATCAACAAAAT
CCGCAGCAGCAACAGCACAGACAACAATCTGGCGAGGAGGATGACGCCTGA

Protein sequence :
MGDVSAVCSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETALPVLLAAWRHGAPAKSEHHNG
NVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKSAALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGIS
DDNIKALPGDNKAIAGEGVRKEGAPLARDVAPARMAAANTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLHDQWQNGNPQRWHLTRDDQQN
PQQQQHRQQSGEEDDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invJ YP_217811.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 6e-134 99
invJ NP_461813.1 needle length control protein Virulence SPI-1 Protein 4e-140 99
spaN NP_457286.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 5e-133 99
spaN NP_806495.1 antigen presentation protein SpaN Virulence SPI-1 Protein 5e-133 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaN YP_008252322.1 antigen presentation protein SpaN VFG0553 Protein 2e-140 99