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Name : CFSAN002069_17490 (CFSAN002069_17490) Accession : YP_008252258.1 Strain : Salmonella enterica CFSAN002069 Genome accession: NC_021812 Putative virulence/resistance : Virulence Product : fimbrial usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 3642310 - 3644955 bp Length : 2646 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCTTCTAAGCGCCTCCCCTTATAGCGCGTCAGGCAAAGACATCGAATTTAATACCGATTTTCTCGATGTAAAAAATCG CGATAACGTTAACATTGCACAGTTTTCTCGTAAGGGTTTTATTCTGCCAGGCGTCTACCTCTTACAAATTAAAATTAACG GACAGACTCTGCCGCAGGAATTTCCTGTTAACTGGGTTATTCCAGAACATGACCCACAAGGAAGTGAGGTTTGCGCAGAA CCAGAATTAGTTACGCAATTGGGTATAAAGCCGGAACTCGCGGAAAAACTCGTCTGGATAACGCACGGTGAACGACAATG TCTGGCGCCAGATTCACTGAAAGGCATGGATTTTCAGGCTGACCTGGGACACTCCACGCTGCTGGTGAATTTACCCCAGG CGTATATGGAATACAGCGATGTCGACTGGGACCCACCCGCCCGCTGGGATAATGGTATTCCCGGCATCATTCTGGATTAC AACATTAATAATCAGCTCCGCCACGATCAAGAAAGCGGCAGCGAAGAGCAAAGCATCAGCGGCAACGGGACGTTAGGCGC GAACCTGGGCGCATGGCGACTGCGGGCCGACTGGCAGGCCAGCTACGACCATCGTGACGATGACGAGAACACTTCCACCC TCCACGATCAGAGCTGGAGCCGCTACTACGCCTATCGCGCACTACCAACGCTCGGGGCCAAACTTACGCTGGGCGAAAGC TATCTCCAGTCTGATGTTTTCGACAGCTTTAACTATATCGGTGCCAGCGTCATTTCTGACGATCAGATGCTGCCACCGAA ACTGCGCGGCTATGCGCCGGAGATCGTGGGCATTGCGCGCTCTAACGCAAAAGTCAAAGTCTCCTGGCAGGGGCGCGTAC TGTATGAAACGCAGGTGCCCGCAGGACCGTTCCGTATTCAGGATCTCAACCAGTCCGTTTCCGGTACGTTGCACGTCACC GTGGAAGAGCAGAACGGTCAGACCCAGGAGTTTGACGTTAACACCGCATCGGTTCCCTTCCTGACGCGCCCCGGCATGGT GCGCTACAAGATGGCGCTGGGCCGCCCGCAGGACTGGGATCATCACCCCATTACCGGCACATTCGCCTCGGCGGAAGCTT CGTGGGGGGTCACCAACGGCTGGTCGCTATATGGCGGCGCAATTGGAGAAAGCAACTATCAGGCCGTGGCGCTGGGAAGC GGTAAGGATCTTGGCGTGGTGGGCGCGGTGGCGGTCGACATTACGCACTCCATCGCCCACATGCCGCAAGACGACGGGTT TGACGGCGAAACGCTGCAGGGTAACTCATATCGCATCAGCTACTCCCGTGACTTTGATGAAATCGACAGCCGACTAACCT TTGCCGGATACCGCTTCTCAGAAAAGAACTTTATGAGCATGAGCGACTATCTGGATGCGAAAACCTATCATCATCTCAAT GCCGGTCACGAAAAAGAACGCTATACGGTCACCTATAACCAGAACTTCCGTGAACAAGGCATGAGCGCCTATTTCAGCTA CTCACGCAGTACCTTCTGGGACAGCCCGGATCAGAGTAACTATAACCTGTCTCTTTCCTGGTACTTCGACTTAGGGTCGA TAAAAAATCTCAGTGCGTCGCTGAACGGCTATCGCAGCGAATATAACGGTGATAAAGATGATGGCGTCTATATCTCGCTG TCTGTTCCCTGGGGCAATGATTCCATCAGCTACAACGGTACGTTTAACGGTAATCAACACCGTAATCAGCTCGGCTATTC CGGCCACAGCCAGAACGGCGATAACTGGCAGCTTCACGTCGGGCAGGATGAACAAGGCGCGCAGGCAGACGGTTATTACA GCCATCAGGGCGCGCTGACGGACATCGATCTGAGCGCGGATTATGAAGAAGGATCGTACCGTTCGCTGGGTATGTCGCTG CGCGGCGGCATGACGCTGACCACCCAGGGCGGCGCGCTACACCGGGGAAGTTTAGCGGGCAGCACACGTTTGCTGGTTGA TACCGACGGCATTGCGGACGTCCCCGTTAGCGGTAACGGCTCGCCAACCTCAACCAACATTTTCGGCAAGGCCGTGATTG CGGATGTCGGAAGCTATTCGCGCAGCCTGGCGCGTATCGATCTGAACAAATTGCCGGAGAAGGCGGAAGCAACTAAGTCG GTTGTGCAGATCACGCTCACCGAAGGCGCCATCGGCTACCGTCACTTTGACGTGGTCAGCGGCGAGAAAATGATGGCGGT TTTCCGGCTGGCAGACGGCGACTTCCCACCGTTCGGCGCCGAAGTGAAAAACGAACGCCAGCAGCAGTTGGGCCTGGTGG CCGATGACGGCAACGCCTGGCTGGCGGGCGTAAAAGCCGGGGAAACATTGAAAGTCTTCTGGGATGGCGCGGCGCAGTGT GAAGCATCACTCCCGCCCACGTTTACACCAGAGCTATTGGCCAACGCGCTATTGCTGCCGTGCAAAATGCTGGAAGGTCA GCCCCCCACCGCACCGCAGAAAAGTTCTCCGCTGCCTGCGCAACCGCTAATCCAGGAACATACGCAAACCGATGGCCAAC CGGCCGCGCCGGTGGCGACAACCACTCAAACCCCGCCCATACCGCTGGCTGACAACCATGCGGTGAATCGCAAGGATATG GAATAA Protein sequence : MLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAE PELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDY NINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGES YLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVT VEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGS GKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLN AGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISL SVPWGNDSISYNGTFNGNQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSL RGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKS VVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQC EASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDM E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 1e-172 | 46 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-168 | 45 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 8e-167 | 45 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 6e-167 | 45 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 3e-168 | 45 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-168 | 45 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 1e-168 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN002069_17490 | YP_008252258.1 | fimbrial usher protein | VFG1548 | Protein | 1e-168 | 45 |
| CFSAN002069_17490 | YP_008252258.1 | fimbrial usher protein | VFG0884 | Protein | 2e-168 | 45 |
| CFSAN002069_17490 | YP_008252258.1 | fimbrial usher protein | VFG0895 | Protein | 1e-168 | 45 |
