Gene Information

Name : CFSAN002069_14165 (CFSAN002069_14165)
Accession : YP_008251611.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2963482 - 2964162 bp
Length : 681 bp
Strand : -
Note : response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAAATATTGATCGTCGAAGACGAAATTAAAACAGGTGAATATCTCAGCAAAGGGCTTACAGAGGCAGGGTTCGTAGT
GGATCACGCTGATAATGGTCTTACCGGATATCATCTCGCCATGACAGCCGAGTATGATTTAGTCATTCTGGATATCATGC
TACCTGATGTGAACGGCTGGGATATCATCCGCATGCTGCGCACTGCCGGAAAGGGTATGCCGGTCTTACTGCTGACAGCC
CTCGGCACGATCGAACATAGGGTCAAAGGACTGGAACTGGGTGCGGACGATTATCTGGTTAAACCCTTTGCGTTTGCCGA
ACTGCTCGCCCGGGTGAGAACCCTTCTGAGGCGGGGAAACACGATGATCACGGAAAGCCAGTTTAAGGTGGCTGACCTCT
CGATTGATCTCGTATCCAGAAAAGTCAGTCGCGCCGGAAACCGCATTGTGCTCACCAGTAAAGAGTTCAGCCTGCTGGAA
TTCTTCATTCGCCATCAGGGAGAGGTTCTTCCCCGCTCCCTGATTGCCTCTCAGGTCTGGGACATGAATTTTGACAGCGA
CACTAATGCGATCGATGTCGCAGTAAAGCGACTCCGCGCTAAAATAGACAACGATTACGGGACAAAGCTGATCCAGACAG
TCCGGGGCGTGGGCTACATGCTGGAGGTCCCGGATGCATAG

Protein sequence : 
MKILIVEDEIKTGEYLSKGLTEAGFVVDHADNGLTGYHLAMTAEYDLVILDIMLPDVNGWDIIRMLRTAGKGMPVLLLTA
LGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGNTMITESQFKVADLSIDLVSRKVSRAGNRIVLTSKEFSLLE
FFIRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRAKIDNDYGTKLIQTVRGVGYMLEVPDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-55 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-54 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0347 Protein 3e-95 94
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0111 Protein 3e-95 87
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0638 Protein 1e-64 62
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0083 Protein 1e-70 61
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0197 Protein 3e-65 60
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0308 Protein 7e-62 58
CFSAN002069_14165 YP_008251611.1 transcriptional regulator BAC0125 Protein 2e-63 56
CFSAN002069_14165 YP_008251611.1 transcriptional regulator HE999704.1.gene1202. Protein 4e-36 41
CFSAN002069_14165 YP_008251611.1 transcriptional regulator AE000516.2.gene3505. Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_14165 YP_008251611.1 transcriptional regulator VFG0596 Protein 1e-55 54
CFSAN002069_14165 YP_008251611.1 transcriptional regulator VFG1390 Protein 3e-42 43
CFSAN002069_14165 YP_008251611.1 transcriptional regulator VFG1389 Protein 4e-34 41