Gene Information

Name : CFSAN002069_10810 (CFSAN002069_10810)
Accession : YP_008250974.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : type-I secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2244691 - 2245617 bp
Length : 927 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGACAACCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGAT
GCTGGAAACTTTTTCGTTGCTGGTATCTTCCGGTGTAGCGATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATG
CATTAAATACCAGAAGCATTATGTATCAGTCGATGTTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAAT
TTATCGCCAGTTCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAATCCCTGAAAAACT
TATGGACATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCCGCGACCGAAGATATTAATG
CCGCAAAATCATCCTATTTTCCGACTGTAGATCTTGTTTCCAGCTATGTACAGAATAACCCGAGCGGTAGTGCCAAAAAA
AGTGATTATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTCAGAAATTCAGCCCAGGA
AAGAAAAATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTTTTGATTAAAACGCGTTATAACATTGATT
CACAACTTTCAAGATACGCCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACT
GAATTATATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGC
ATATGTAAGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGTTACAGCAACTCTCATTGATTTTTCATTTAATGG
ATTATTTAAAAGGAAATACTGAAAGTGAGTTAAATGTAATGAAATGA

Protein sequence :
MTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLN
LSPVQIQSDEKFNLFKKYIFVEIPEKLMDMVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKK
SDYEDEFKTGINVSFNIFNGFRNSAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSRYAAAKETYSVAERSHTNALQLT
ELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLIFHLMDYLKGNTESELNVMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4138 YP_219125.1 ABC transporter outer membrane protein Not tested SPI-4 Protein 1e-138 99
STM4259 NP_463124.1 ABC exporter outer membrane component Not tested SPI-4 Protein 1e-138 99
spi4_C AAC26641.1 ABC exporter outer membrane component homolog Virulence SPI-4 Protein 1e-138 99
siiC CAE11795.1 putative type-I secretion protein, putative outer membrane component Virulence SPI-4 Protein 7e-139 99
STY4456 NP_458556.1 putative type-I secretion protein Not tested SPI-4 Protein 6e-134 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002069_10810 YP_008250974.1 type-I secretion protein VFG0579 Protein 4e-139 99