Gene Information

Name : araD (CFSAN002069_10145)
Accession : YP_008250849.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 2096137 - 2096823 bp
Length : 687 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCAAAAGCTCAAGCAGCAGGTATTTGACGCTAACATGGATTTGCCCCGTTATGGACTGGTGACGTTTACCTGGGGCAA
CGTCAGCGCTATCGATCGCGAACGCGGGCTGGTGGTAATTAAGCCAAGCGGTGTCGCCTATGAAACCATGCAGGCAGATG
ACATGGTGGTGGTGGATATGGATGGCAACGTGGTGGAGGGAGGTTATCGTCCTTCTTCCGATACCGCTACCCATCTGGCG
CTGTATCAACGCTATCCGTCGCTTGGCGGCGTCGTTCATACCCACTCCACCCACGCCACGGCATGGGCGCAGGCGGGGAT
GGCTATTCCAGCGCTCGGCACCACGCACGCGGACTATTTCTTTGGCGATATTCCTTGTACCAGAGCGTTAAGCGAAGAAG
AAGTGCAGGGCGAGTACGAGCTGAACACCGGTAAGGTGATTATCGAAACGCTGGGCGAGGTGGAACCGCTGCATACGCCA
GGCATTGTCGTGTATCAACACGGGCCGTTCGCCTGGGGGAAAGATGCGCACGATGCGGTACATAACGCGGTCGTCATGGA
GGAAGTAGCGCGAATGGCGTGGATTGCGCGCGGCATTAACCCGGCGCTGAATCCCATCGACGATTATCTGATGAATAAAC
ACTTCATGCGTAAGCATGGTCCGAATGCGTATTACGGGCAGAAGTGA

Protein sequence :
MQKLKQQVFDANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMQADDMVVVDMDGNVVEGGYRPSSDTATHLA
LYQRYPSLGGVVHTHSTHATAWAQAGMAIPALGTTHADYFFGDIPCTRALSEEEVQGEYELNTGKVIIETLGEVEPLHTP
GIVVYQHGPFAWGKDAHDAVHNAVVMEEVARMAWIARGINPALNPIDDYLMNKHFMRKHGPNAYYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 1e-57 57