|
Name : CFSAN002069_08165 (CFSAN002069_08165) Accession : YP_008250461.1 Strain : Salmonella enterica CFSAN002069 Genome accession: NC_021812 Putative virulence/resistance : Virulence Product : fimbrial protein SteB Function : - COG functional category : - COG ID : - EC number : - Position : 1650447 - 1653104 bp Length : 2658 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGGCTCACTATAAAAAATTTCGTCTGAGCACGCTTGCGGCCGTGGTGGGTATTGTTCTGGCTGTCGGTCCGGAAAATAG CTATGCGGAAGCGCCCATTCAATTTAATACCCGATTTCTTGATGTTAAAGATGATGCCAGCCTGGATCTCTCCCGTTTTT CCCGTAAAGGCTACATTATGCCGGGGAGCTATCATCTCCAGGTGCTGGTCAATCAGAGTCAAATTGCCCAGGATAATGTT ATTACGTATTCCGTTGATAATAACGATCCTGATAACACCTATCCCTGTTTATCGCCTGAACTGGTATCGCTGCTGGGGTT AAAACCTGAAATAGCAGATAAAATGATCTGGATAAATGCCGGTCAGTGTCTGCAACCAGATCAACTGGAAGGGATGGAAA CCCAAACGGATTTAAGCCAGTCAACGCTGACGGTGATTATTCCGCAGGCCTATCTGGAATACAGCGATGAAGAGTGGGAT CCACCTTCCCGCTGGGATGAAGGGATTCCCGGCGTATTATTTGACTACAACGTTAACAGCCAGTGGCGACATGCTGAACA TGATGACGGCGATGAGTATGACATCAGCGGCAACGGCACGGTGGGTGCCAACCTCGGCGCGTGGCGTTTGCGCGCGGACT GGCAGGCTAACTATCGTCACGAAAATGACAGCGAAGATAAAGACAACTTTGGCTCCAGTTCCGAACAGAACTGGGACTGG AACCGCTATTACGCCTGGCGGGCGATCCCGCAGCTCCGGGCGCAGCTAACGCTGGGCGAAGGATCGCTGGAATCCGATAT TTTCGACGGCTTTAACTATGTTGGCGGCAGCCTTATCACCGACGATCAGATGTTACCGCCTAATCTGCGCGGCTACGCCC CGGATATATCAGGCGTGGCGCGCACCAACGCCAAAGTCACCGTGACCCAGCGCGGGCGGGTGATTTATGAGTCGCAGGTC CCGGCTGGGCCGTTTCGCATTCAGGATATTAATGAAACGGTATCCGGCGATCTACACGTCAAAATTGAAGAACAAAGCGG TCAGGTGCAGGAATATGACGTCAGCACCGCCTCCATTCCGTTTCTGACCCGTCCCGGCCAGGTGCGCTACAAGTTGGCAG CCGGGCGACCGCAGGACTGGGATCACAATATGGAAGGCGGCTTTTTCACCTCAGCCGAAGCCTCCTGGGGGATCGCTAAC GGCTGGTCGCTGTACGGCGGTGCCATCGGTGAGCAGGATTATCAGGCGCTGGCGTTAGGACTGGGGCGCGATCTGGCGCT GCTGGGCGCGTTTTCCGTCGATGTCACCCATTCCCGTGCGACGCTGCCAGAGGGTAGCGCCTACGGCGACGGCACCATTC AGGGTAACTCGTTCCGTGCCAGCTACGCTAAAGATTTTGATGATATAGACAGCCGTCTGACGTTTGCTGGTTATCGCTTT TCCGAAGAAAACTACATGACGATGGACGAGTTTATCGATACGCATAATGACGATAACGATCGTCAGCGCACCGGCCACGA TAAAGAGATGTATACCCTGACGTACAGCCAGAACTTTTCGGCAATAAACGTCAACGCCTATATCAACTACACCCATCGCA CCTACTGGAATCAACCTAACCAGGACAGCTATAACCTGACGCTGTCGCACTATTTCGATGTCGGTGAGGTGCGCGGGATC AGTCTGTCGGTGAACGGTTTTCGCAACGAATATGACAATGAGCGTGATGACGGCGTGTACGTCTCGCTCAGTATTCCGTG GGGCAACAACCGCACGCTGAGCTACAACGGCTCCTTTAGCGATGACAACAACAGCAATCAGGTCGGCTATTACGAGCGCA TTGACGATCGCAATAACTACCAGATCAACGCTGGTCGCACGGATAACGGTGCGACTCTCGACGGCTACTACCGTCATCAA GCGAGCTATGCCGACATTGACGTCAGTGCGAACTATCAGGAAGGCGACTATACCTCCGGCGGGCTGAACATCCAGGGCGG CGCGACGCTGACTGCTAAAGGCGGGGCGCTGCACCGCACCAGCGTCAACGGCGGCTCGCGGCTGCTGGTGGATGTCGGCG ATGAAGCGAACGTACCCATCTCCGGCTACAGCACGCCGGTATATACCAACGCGTTTGGTAAAGCCGTCATTGTCGACGTC AACGACTACTACCGCAACCAGGTGAAAATCGACATTACCCAGTTGCCGGAAGACGCGGAAGCAATCCTCTCCATCGCTCA GGCGACCCTGACGGAAGGGGCGATCGGTTATCGCCGCATGGAGGTGCTCAGCGGTAAAAAAGCCATGGGCAGTATCCGCC TGCGCGATGGCGGCACACCCCCCTTCGGTGCGGAAGTTTACAACAGCCGCCAGCAACAGTTAGGGATCGTCGGCGAAGGC GGCAGCGTTTATCTGATCGGCATTAACCCCGGCGAGCGGTTGCAGGTGACATGGGAAGGTAAAACGCAGTGTGAAGCGGC GTTGCCCGATCCGCTGCCGGGCGATCTGTTTAGCGGCCTGTTGCTGCCGTGCATCGGCGACGCTTCATCACCTGAGGCAA CGCAGCCCGAAGAGAAACCATTACTCCAGCTTCATACGCAGCGGCGGACGTCTTCGACGCAACCCGAAGCGCTCTCTTCT CGTTATCCAACACATTGA Protein sequence : MAHYKKFRLSTLAAVVGIVLAVGPENSYAEAPIQFNTRFLDVKDDASLDLSRFSRKGYIMPGSYHLQVLVNQSQIAQDNV ITYSVDNNDPDNTYPCLSPELVSLLGLKPEIADKMIWINAGQCLQPDQLEGMETQTDLSQSTLTVIIPQAYLEYSDEEWD PPSRWDEGIPGVLFDYNVNSQWRHAEHDDGDEYDISGNGTVGANLGAWRLRADWQANYRHENDSEDKDNFGSSSEQNWDW NRYYAWRAIPQLRAQLTLGEGSLESDIFDGFNYVGGSLITDDQMLPPNLRGYAPDISGVARTNAKVTVTQRGRVIYESQV PAGPFRIQDINETVSGDLHVKIEEQSGQVQEYDVSTASIPFLTRPGQVRYKLAAGRPQDWDHNMEGGFFTSAEASWGIAN GWSLYGGAIGEQDYQALALGLGRDLALLGAFSVDVTHSRATLPEGSAYGDGTIQGNSFRASYAKDFDDIDSRLTFAGYRF SEENYMTMDEFIDTHNDDNDRQRTGHDKEMYTLTYSQNFSAINVNAYINYTHRTYWNQPNQDSYNLTLSHYFDVGEVRGI SLSVNGFRNEYDNERDDGVYVSLSIPWGNNRTLSYNGSFSDDNNSNQVGYYERIDDRNNYQINAGRTDNGATLDGYYRHQ ASYADIDVSANYQEGDYTSGGLNIQGGATLTAKGGALHRTSVNGGSRLLVDVGDEANVPISGYSTPVYTNAFGKAVIVDV NDYYRNQVKIDITQLPEDAEAILSIAQATLTEGAIGYRRMEVLSGKKAMGSIRLRDGGTPPFGAEVYNSRQQQLGIVGEG GSVYLIGINPGERLQVTWEGKTQCEAALPDPLPGDLFSGLLLPCIGDASSPEATQPEEKPLLQLHTQRRTSSTQPEALSS RYPTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 6e-159 | 46 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 2e-153 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 7e-153 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 5e-153 | 43 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 2e-153 | 43 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 2e-153 | 43 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 2e-153 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN002069_08165 | YP_008250461.1 | fimbrial protein SteB | VFG1548 | Protein | 1e-153 | 43 |
| CFSAN002069_08165 | YP_008250461.1 | fimbrial protein SteB | VFG0884 | Protein | 1e-153 | 43 |
| CFSAN002069_08165 | YP_008250461.1 | fimbrial protein SteB | VFG0895 | Protein | 8e-154 | 43 |
