Gene Information

Name : CFSAN002069_07760 (CFSAN002069_07760)
Accession : YP_008250387.1
Strain : Salmonella enterica CFSAN002069
Genome accession: NC_021812
Putative virulence/resistance : Virulence
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1566920 - 1567405 bp
Length : 486 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

ATGGCTTATGACATTTTTCTGAAAATTGACGGCATCGACGGTGAGTCGATGGATGACAAACACAAAAATGAAATTGAAGT
ACTGAGCTGGCGCTGGAATATCCATCAGGAATCCACCATGCACGCCGGTAGCGGCCTCGGCTCCGGTAAGGTCTCCGTCA
CCAACCTGGATTTTGATCACTATATCGACCGCGCCAGCCCGAACCTGTTCAAATACTGCGCCTCCGGCAAGCACATTCCG
CAGGCCATTCTGGTTATGCGTAAGGCTGGCGGCAATCCGCTGGAGTACCTCAAGTATACCTTCACCGACCTGATTGTCGC
CGTGGTTTCCCCGAGCGGCAGCCACGATGGTGAAATCGCCTCCCGTGAAACGGTAGAGCTTTCTTTCAGCACTGTGAAAC
AGGAATACGTGGTGCAGAACCAGCAGGGCGGCAGCGGCGGCACTATCACCGCAGGTTACGATTTCAAGGCGAACAAAGAA
ATTTAA

Protein sequence :

MAYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGSGLGSGKVSVTNLDFDHYIDRASPNLFKYCASGKHIP
QAILVMRKAGGNPLEYLKYTFTDLIVAVVSPSGSHDGEIASRETVELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKE
I

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	5e-72	100

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CFSAN002069_07760	YP_008250387.1	Hcp1 family type VI secretion system effector	VFG2071	Protein	1e-23	45