Gene Information

Name : SEEH1578_00600 (SEEH1578_00600)
Accession : YP_008248856.1
Strain :
Genome accession: NC_021811
Putative virulence/resistance : Virulence
Product : type IV pepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 108135 - 108749 bp
Length : 615 bp
Strand : +
Note : -

DNA sequence : 
ATGTTAGTAGAAAATATTAATACCACTTTAACTGGAAATAATAAGAAGAATGAGCCTCATGATAAAGGATGGGCAATTTT
GGAGCAGGGAACAATAGCGCTCGTTGTTCTTTTTGTTATAGTCGTTGTTCTGGGTAGTTTGTATGCGTTGCGTACAAGAG
CCAATGTGGCAACTGAAACCGCAAATATACAAACAATTATCACAAGTGCCCAGAGCCTGCTAAAAGGTAGCGATGGATAT
ACATTTACCAGCAGTGCCAAAATGACAGGTGCCCTCATTCAGATGGGTGTCATTCCCTCTGGGATGACCGTACAGGGCGA
CAAAACATCTGGTACAGCAACGCTCTATAACGCATGGGGCGGTGCTGTAACTGTTGCCCCGGCTTCAACATCAGGGTTCA
ACAACGGTTTTACCGTTACCTATGATAAAGTCCCACAGGATGCCTGTATCCAGATTGCCACACGAATCAGTAAAACTGGT
TTAACTAACGGCATTACCCTGAACAGTACTGCTCACAGTGATGGAAAAGTCACTACTGAAGAAGCCAGTACGCAATGCAA
GGCAGATAATGGCAGCACTGGTACAAACAAACTTATCTTCACCATCAATGGTTAA

Protein sequence : 
MLVENINTTLTGNNKKNEPHDKGWAILEQGTIALVVLFVIVVVLGSLYALRTRANVATETANIQTIITSAQSLLKGSDGY
TFTSSAKMTGALIQMGVIPSGMTVQGDKTSGTATLYNAWGGAVTVAPASTSGFNNGFTVTYDKVPQDACIQIATRISKTG
LTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGTNKLIFTING

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 3e-44 57
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 2e-45 56
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 4e-46 56
pilS AAC98887.1 PilS Virulence SPI-7 Protein 8e-36 52
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 1e-35 52
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 1e-35 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_00600 YP_008248856.1 type IV pepilin VFG2315 Protein 9e-45 57