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Name : SEEH1578_23245 (SEEH1578_23245) Accession : YP_008248695.1 Strain : Salmonella enterica 41578 Genome accession: NC_021810 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaS Function : - COG functional category : - COG ID : - EC number : - Position : 4754565 - 4755635 bp Length : 1071 bp Strand : - Note : COG1377 Flagellar biosynthesis pathway, component FlhB DNA sequence : ATGTCCTCGAATAAAACAGAAAAACCGACTAAAAAACGGCTGGAAGACTCCGCTAAAAAAGGCCAGTCATTTAAAAGTAA AGATCTCATTATCGCCTGCCTGACGCTGGGAGGAATTGCCTATCTGGTGTCGTATGGCTCATTTAATGAGTTTATGGGGA TAATTAAGATCATTATTGCGGATAATTTTGATCAGAGCATGGCTGACTACAGTTTGGCCGTTTTTGGGATAGGGTTAAAA TATCTGATTCCATTTATGCTGCTCTGCTTAGTGTGTTCCGCATTACCGGCGTTATTACAGGCCGGTTTTGTGCTGGCGAC AGAAGCATTAAAGCCTAATTTATCGGCGTTAAACCCGGTAGAAGGGGCAAAAAAACTTTTTAGTATGCGCACGGTTAAAG ATACGGTCAAAACCCTACTGTATCTCTCATCCTTTGTGGTGGCCGCCATCATTTGCTGGAAGAAATATAAGGTTGAAATC TTTTCTCAGCTAAATGGCAATATTGTAGGTATTGCCGTCATTTGGCGTGAACTTCTCCTCGCATTGGTATTAACTTGCCT TGCTTGCGCATTGATTGTCTTATTATTGGATGCTATTGCGGAATATTTCCTGACCATGAAAGATATGAAAATGGATAAAG AAGAAGTGAAGCGTGAAATGAAGGAGCAGGAAGGGAACCCAGAGGTTAAATCTAAAAGACGTGAAGTTCATATGGAAATT CTGTCTGAACAGGTGAAATCTGATATTGAAAACTCACGCCTGATTGTTGCCAACCCCACGCATATTACGATCGGGATTTA TTTTAAACCCGAATTGATGCCGATTCCGATGATCTCGGTGTATGAAACGAATCAGCGCGCACTGGCCGTCCGCGCCTATG CGGAGAAGGTTGGCGTACCTGTGATCGTCGATATCAAACTGGCGCGCAGTCTTTTCAAAACCCATCGCCGTTATGATCTG GTGAGTCTGGAAGAAATTGATGAAGTTTTACGTCTTCTGGTTTGGCTGGAAGAGGTAGAAAACGCGGGCAAAGACGTTAT TCAGCCACAAGAAAACGAGGTACGGCATTGA Protein sequence : MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADNFDQSMADYSLAVFGIGLK YLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI FSQLNGNIVGIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDL VSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-133 | 100 |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 4e-132 | 99 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 5e-133 | 99 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 5e-133 | 99 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 5e-67 | 55 |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 3e-59 | 54 |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 4e-43 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEH1578_23245 | YP_008248695.1 | type III secretion system protein SpaS | VFG0548 | Protein | 7e-134 | 100 |
| SEEH1578_23245 | YP_008248695.1 | type III secretion system protein SpaS | VFG1015 | Protein | 7e-52 | 49 |
| SEEH1578_23245 | YP_008248695.1 | type III secretion system protein SpaS | VFG2452 | Protein | 4e-48 | 45 |
