Gene Information

Name : SEEH1578_23190 (SEEH1578_23190)
Accession : YP_008248686.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : invasion protein IagB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4744567 - 4745049 bp
Length : 483 bp
Strand : +
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGCATTATTTTTTTATCATCGTAATCTGGTTGCTTAGCATAAATACGGCATGGGCTGATTGCTGGCTTCAGGCTGAAAA
AATGTTCAATATTGAATCCGAACTACTTTACGCTATCGCCCAGCAGGAATCGGCGATGAAACCTGGCGCCATTGGTCATA
ACCGAGATGGTTCAACCGATCTTGGCCTGATGCAAATTAACAGCTTCCATATGAAAAGGCTGAAAAAAATGGGGATTAGT
GAAAAACAGTTGTTACAGGACCCCTGCATTTCTGTCATTGTGGGCGCCTCCATTTTATCAGATATGATGAAAATCTACGG
TTATAGCTGGGAGGCCGTTGGCGCTTATAATGCCGGGACGTCGCCGAAACGATCGGATATAAGGAAACGTTATGCTAAAA
AAATTTGGGAGAATTACAGAAAATTAAAAGGAATGTCAGCAGAAGAGAAAAACAAAAGACTTTCTATCGCGGCAAACAAA
TAA

Protein sequence :
MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGHNRDGSTDLGLMQINSFHMKRLKKMGIS
EKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGTSPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAANK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 7e-71 100
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 6e-70 99
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 6e-70 99
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 8e-71 99
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 2e-18 45
unnamed AAC31524.1 L0045 Not tested LEE Protein 1e-18 45
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 2e-18 45
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 1e-18 45
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 2e-18 45
unnamed AAK26704.1 unknown Not tested LEE Protein 1e-18 45
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 2e-18 45
unnamed AAL57531.1 unknown Not tested LEE Protein 1e-18 45
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 1e-18 45
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 1e-18 45
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 3e-18 44
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 2e-18 44
unnamed AAL06358.1 unknown Not tested LEE Protein 3e-19 44
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 1e-22 41
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 1e-22 41
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 1e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_23190 YP_008248686.1 invasion protein IagB VFG0539 Protein 2e-71 100
SEEH1578_23190 YP_008248686.1 invasion protein IagB VFG0823 Protein 6e-19 45
SEEH1578_23190 YP_008248686.1 invasion protein IagB VFG0994 Protein 1e-26 44
SEEH1578_23190 YP_008248686.1 invasion protein IagB VFG0719 Protein 9e-19 44
SEEH1578_23190 YP_008248686.1 invasion protein IagB VFG1789 Protein 1e-15 41