Gene Information

Name : SEEH1578_23145 (SEEH1578_23145)
Accession : YP_008248677.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Unknown
Product : type III secretion system effector protein OrgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4736371 - 4736823 bp
Length : 453 bp
Strand : -
Note : -

DNA sequence :
GTGATACCGGGTACGATTCCGACTTCTTATTTGGTCCCGACAGCAGATACTGAAGCGACGGGTGTGGTTTCGTTGAGTGC
CAGGGCCGCTATGCTGAATAATGTGGATAGCGCGCCTTTAAGCAATGGCGGCGACGTTGATCTTTATGATGCATTCTACC
AACGACTTTTGGCGCTTCCTGAGTCAGCCTCTTCTGAAACGCTTAAAGATAGCATTTATCAAGAGATGAATGCCTTCAAA
GATCCTAACAGTGGTGATTCGGCTTTTGTTTCTTTTGAGCAGCAAACGGCTATGCTACAAAACATGTTAGCAAAAGTTGA
ACCGGGCACCCATTTATATGAGGCTTTAAACGGGGTATTAGTTGGTACAATGAATGCACAGTCACAAATGACCTCCTGGA
TGCAGGAGATTATTTTATCGGGCGGGGAAAACAAAGAGGCAATTGACTGGTGA

Protein sequence :
MIPGTIPTSYLVPTADTEATGVVSLSARAAMLNNVDSAPLSNGGDVDLYDAFYQRLLALPESASSETLKDSIYQEMNAFK
DPNSGDSAFVSFEQQTAMLQNMLAKVEPGTHLYEALNGVLVGTMNAQSQMTSWMQEIILSGGENKEAIDW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC2800 YP_217787.1 hypothetical protein Not tested SPI-1 Protein 5e-64 100
orgC NP_461789.1 hypothetical protein Not tested SPI-1 Protein 2e-63 99
STY2989 NP_457262.1 hypothetical protein found within S. typhi pathogenicity island 1 Not tested SPI-1 Protein 1e-63 99
t2770 NP_806471.1 hypothetical protein Not tested SPI-1 Protein 1e-63 99