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Name : SEEH1578_23120 (SEEH1578_23120) Accession : YP_008248672.1 Strain : Salmonella enterica 41578 Genome accession: NC_021810 Putative virulence/resistance : Virulence Product : Manganese ABC transporter, inner membrane permease protein SitD Function : - COG functional category : - COG ID : - EC number : - Position : 4731983 - 4732831 bp Length : 849 bp Strand : + Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components DNA sequence : ATGTTCTTAACAACGTTACTGGAACCCTTTCAGTTTGATTTTATGGTGAACGCCCTTATGGTTTCGGTCATTGTGGCGAT TCCCTGCGCCTTACTGTCCGTGTTTTTAGTGTTAAAAGGCTGGGCGTTAATGGGCGATGCAATGAGTCATGCGGTATTCC CCGGGGTCGTGCTGGCATATATTGTGGGGATCCCCCTGGCGATTGGCGCTTTCATTGCCGGATTATTTTGCGCTATCGCG ACCGGCTATCTGGACGATAACAGCCGCATCAAACGTGATACGGTGATGGGCATCGTCTTTTCCGGGATGTTTGGCGCAGG TCTGGTGCTCTATGTTTCTATTCAATCGGAAGTGCATCTGGATCACATCCTGTTTGGGGATATGCTGGGCGTATCGCTGG GGGATATCGTACAAACGTCAGTTATTGCACTGGGTATTGCGTTAATCATTGGGCTGAAATGGAAAGATCTCCTGCTACAC GCTTTTGACCCGCACCAGGCGAAAGCCAGCGGGCTGAATATCACGCTACTGCATTATGGCCTGCTATGTATGATTGCGCT GACTATCGTCGCCACGCTGAAATCGGTGGGTATTATTCTGTCGATTTCATTGCTTATCGCCCCCGGCGCAATTGCCATTT TGCTGACGCGACGCTTTGCGCGCGCGCTGGGATTAGCGGTGAGTCTGTCAGTTATTACCGCTTTTGCGGGCGTCTATCTG TCTTTTTATCTTGATAGCGCGCCAGCGCCGACCATCGTGGTATTATTTGCCATCGTGTTTATTGCGGTATTTATTTACGC AACATGGCGCGACAGGCGTAATGAAATCGTACCAGAGGCGCAAGGTTAA Protein sequence : MFLTTLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIA TGYLDDNSRIKRDTVMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH AFDPHQAKASGLNITLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYL SFYLDSAPAPTIVVLFAIVFIAVFIYATWRDRRNEIVPEAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-102 | 99 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-102 | 99 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-102 | 99 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-102 | 99 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 1e-102 | 99 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 1e-33 | 42 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-33 | 42 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 2e-33 | 42 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-33 | 42 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-33 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEH1578_23120 | YP_008248672.1 | Manganese ABC transporter, inner membrane permease protein SitD | BAC0352 | Protein | 8e-103 | 99 |
| SEEH1578_23120 | YP_008248672.1 | Manganese ABC transporter, inner membrane permease protein SitD | BAC0442 | Protein | 3e-55 | 54 |
| SEEH1578_23120 | YP_008248672.1 | Manganese ABC transporter, inner membrane permease protein SitD | BAC0441 | Protein | 1e-33 | 43 |
| SEEH1578_23120 | YP_008248672.1 | Manganese ABC transporter, inner membrane permease protein SitD | BAC0351 | Protein | 7e-34 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEH1578_23120 | YP_008248672.1 | Manganese ABC transporter, inner membrane permease protein SitD | VFG0528 | Protein | 8e-103 | 99 |
| SEEH1578_23120 | YP_008248672.1 | Manganese ABC transporter, inner membrane permease protein SitD | VFG0527 | Protein | 7e-34 | 42 |
