Gene Information

Name : SEEH1578_23110 (SEEH1578_23110)
Accession : YP_008248670.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : manganese/iron transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4730314 - 4731135 bp
Length : 822 bp
Strand : +
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence :
ATGAGTCAATCTGCGATTACCGTTGATCAGGTCACGGTGACGTATCGCAACGGTCATACCGCCCTACGGGACGCCACTTT
TCAGGTGCCTGGCGGTTCAATCGCCGCGCTGGTAGGCGTAAATGGTTCCGGTAAGTCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCAGGGCGATATCACTATCCTGCAACAGTCAGTCAACAAGGCGCTGAAAAAAAACCTCATTGCT
TATGTTCCGCAATCGGAAGAAGTGGACTGGTCATTTCCGGTGCTGGTAGAAGATGTGGTGATGATGGGACGCTACGGCCA
TATGGGCTGGCTACGCCGTCCCACTGCGTATGATCACGCCTGTGTTGACGCCGCGCTGGGGCGGGTAGATATGCAGGAGT
ATCGTCACAGGCAGATTGGCGAGCTGTCCGGCGGGCAGAAAAAACGTGTGTTTCTTGCCAGGGCCATCGCTCAGGATGGA
CAGGTAATCCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCGCGAATCATCGATCTACTGCGGGAACT
GCGCGATGAAGGCCGCACGATGCTGGTCTCAACGCATAATCTCGGCTCCGTCACCGAGTTTTGCGACTATACGGTAATGA
TTAAAGGAACCGTACTGGCCAGCGGCCCTACCGAAACCACGTTTACCGCCGCGAATCTGGAACAGGCGTTTAGCGGCGTT
CTACGTCATATCGCGTTAAGCGGAGGTGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGGCGCGTGGC
CAGCGGAGGAAAATCGTCATGA

Protein sequence :
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNKALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAYDHACVDAALGRVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAFSGV
LRHIALSGGEEHIITDDERPFISRRVASGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-125 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-125 99
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-126 99
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 8e-127 99
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-127 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_23110 YP_008248670.1 manganese/iron transporter ATP-binding protein BAC0350 Protein 4e-127 99
SEEH1578_23110 YP_008248670.1 manganese/iron transporter ATP-binding protein BAC0440 Protein 4e-79 63
SEEH1578_23110 YP_008248670.1 manganese/iron transporter ATP-binding protein BAC0400 Protein 5e-48 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_23110 YP_008248670.1 manganese/iron transporter ATP-binding protein VFG0526 Protein 4e-127 99