Gene Information

Name : smpB (SEEH1578_22465)
Accession : YP_008248542.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4583200 - 4583682 bp
Length : 483 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGACGAAGAAAAAAGCACATAAACCGGGCTCAGCCACCATCGCGCTGAATAAGCGCGCCCGGCACGAATACTTTATCGA
AGAAGAGTTCGAGGCTGGTCTCGCCCTGCAAGGCTGGGAAGTAAAATCTCTGCGCGCAGGAAAAGCCAATATCGGCGACA
GTTACGTTATCCTCAAAGATGGCGAGGCCTGGCTGTTTGGCGCAAACTTTACGCCGATGGCGGTCGCCTCGACACATGTT
GTATGCGACCCAACCCGAACCCGCAAACTGTTGTTAAATCAGCGTGAGCTTGATTCGCTGTATGGCCGTATTAATCGTGA
AGGTTATACTGTCGTCGCGCTTTCTCTGTACTGGAAAAATGCCTGGTGCAAAGTAAAGATCGGCGTGGCGAAAGGTAAAA
AACAACATGATAAACGTTCCGATCTTAAAGAACGTGAGTGGCAACTGGATAAAGCACGCATTATGAAAAATGCAGGCCGA
TAA

Protein sequence :
MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHV
VCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-51 71
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 8e-25 47
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 4e-21 43