Gene Information

Name : SEEH1578_20075 (SEEH1578_20075)
Accession : YP_008248068.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : transcriptional regulator MirA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4051404 - 4052135 bp
Length : 732 bp
Strand : +
Note : COG0789 Predicted transcriptional regulators

DNA sequence : 
ATGGCGCTTTACACAATTGGTGAAGTGGCTTTGCTTTGTGATATCAATCCTGTCACGTTGCGCGCGTGGCAGAGACGTTA
TGGACTTTTAAAACCACAGCGAACGGATGGCGGTCATCGTCTGTTTAACGATGCCGATATCGACAGAATCCGCGAAATCA
AGCGCTGGATAGATAACGGCGTCCAGGTCAGCAAAGTCAAAGTGCTGCTCAGTAGCGACAGTAGCGAACAACCTAACGGC
TGGCGCGAACAGCAGGAGATCCTGCTGCACTACCTGCAAAGCAGTAATCTGCACAGTTTACGGTTATGGGTCAAAGAACG
CGGTCAGGATTATCCTGCCCAAACATTGACCACTAACCTGTTCGTCCCACTGCGGCGACGATTACAGTGCCAACAACCCG
CCCTTCAGGCGCTGCTCGGCATTCTTGACGGTATCCTGATCAACTATATTGCGCTCTGCCTGGCGTCTGCGCGTAAGAAA
CAGGGAAAAGATGCGTTGGTGATCGGCTGGAATATCCATGATACCACCCGCCTGTGGCTGGAAGGTTGGGTCGCCAGCCA
ACAGGGATGGCGAATCGACGTGTTGGCGCATTCGCTTAGCCAGTTCCGCCCGGAACTTTTTGACGGCAAGACGTTACTGG
TATGGTGCGGAGAAAACCAGACGCTGGCGCAGCAGCAGCAACTCCTGGCATGGCGCGCCCAGGGACACGACATTCATCCC
CTTGGCGTTTAA

Protein sequence : 
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNG
WREQQEILLHYLQSSNLHSLRLWVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKK
QGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGENQTLAQQQQLLAWRAQGHDIHP
LGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 5e-34 45
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 4e-34 45
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 8e-34 44
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-34 44
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_20075 YP_008248068.1 transcriptional regulator MirA VFG0491 Protein 2e-34 45