Gene Information

Name : SEEH1578_19965 (SEEH1578_19965)
Accession : YP_008248046.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : putative cytoplasmic protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4027615 - 4028031 bp
Length : 417 bp
Strand : -
Note : -

DNA sequence :
ATGTATTCAAGAGCCGATCGCTTATTAAGACAGTTTTCACTGAAATTAAATGCCGATTCAATTGCCTTTGACGAAAACAG
ATTATGCTCATTTATTATAGATAACCGTCACCGTATCTTACTAACAAGCACTAACAGTGAGTATATAATGATATACGGTT
TTTGCGGAAAACCTCCGGATAATAATAATCTTGCTTTTGAATTTCTCAATGCTAATTTATGGTTTGCAGAGAATAATGGA
CCACATTTGTGTTATGATAATAACTCACAATCATTATTACTGGCTCTCAACTTCTCACTCAATGAAAGTTCTGTAGAGAA
ACTTGAATGTGAAATTGAGGTAGTTATTAGATCAATGGAGAATCTGTATCACATTTTACAGGATAAAGGAATAACTCTGG
ATACCGATTATACGTGA

Protein sequence :
MYSRADRLLRQFSLKLNADSIAFDENRLCSFIIDNRHRILLTSTNSEYIMIYGFCGKPPDNNNLAFEFLNANLWFAENNG
PHLCYDNNSQSLLLALNFSLNESSVEKLECEIEVVIRSMENLYHILQDKGITLDTDYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orfU AAC38391.1 OrfU Not tested LEE Protein 9e-29 60
cesT AAK26723.1 CesT Virulence LEE Protein 1e-28 60
cesT AAL57550.1 CesT Virulence LEE Protein 1e-28 60
cesT CAC81870.1 CesT protein Virulence LEE II Protein 1e-28 60
cesT YP_003223467.1 chaperone CesT Not tested LEE Protein 2e-28 60
cesT CAI43866.1 CesT protein Virulence LEE Protein 1e-28 60
cesT YP_003232161.1 T3SS chaperone CesT Virulence LEE Protein 2e-28 60
unnamed AAC31505.1 L0026 Not tested LEE Protein 1e-28 60
Z5111 NP_290260.1 hypothetical protein Not tested LEE Protein 1e-28 60
unnamed ACU09450.1 putative factor Tir chaperone Virulence LEE Protein 1e-28 60
ECs4560 NP_312587.1 protein CesT Virulence LEE Protein 1e-28 60
unnamed AAL06377.1 CesT Virulence LEE Protein 9e-29 59
cesT YP_003236080.1 putative chaperone CesT Not tested LEE Protein 2e-28 59
cesT AFO66323.1 putative chaperone Not tested SESS LEE Protein 8e-27 59
cesT AFO66393.1 putative chaperone Not tested SESS LEE Protein 8e-27 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_19965 YP_008248046.1 putative cytoplasmic protein VFG0738 Protein 4e-29 60
SEEH1578_19965 YP_008248046.1 putative cytoplasmic protein VFG0804 Protein 4e-29 60