Gene Information

Name : SEEH1578_19035 (SEEH1578_19035)
Accession : YP_008247860.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Resistance
Product : amino-acid ABC transporter ATP-binding protein YecC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3836408 - 3837160 bp
Length : 753 bp
Strand : -
Note : COG1126 ABC-type polar amino acid transport system, ATPase component

DNA sequence : 
ATGAGTGCTATCGAAGTCACCAACCTGGTCAAAAAATTTCATGGTCAAACGGTGCTGCACGGTATCGACCTTGAGGTGAA
GCCCGGAGAAGTCGTCGCCATTATCGGCCCGAGCGGCTCAGGGAAGACAACGTTATTACGCTGCATTAACCTGCTGGAAC
AACCGGAAGCGGGTACCATTAAAGTGGGCGATATTATCATCGATACCGCCCGCCCATTCAGCCAGCAAAAAGGGTTGATT
CGCCAGCTACGTCAGCATGTCGGCTTTGTCTTTCAGAGTTTTAACCTGTTCCCGCATCGTACCGTGCTGGAAAATATCAT
TGAAGGTCCGGTGATTGTAAAGGGAGAGCCGAAAGCCGAGGCGACGGCGCTGGCGCGGGAACTGTTAGCCAAAGTCGGGT
TGGCCGGTAAAGAGACCCGTTATCCGCGCCGCCTGTCGGGCGGGCAACAGCAGCGCGTGGCGATTGCACGCGCGCTGGCG
ATGCGCCCGGAAGTGATTCTGTTTGATGAGCCGACGTCGGCGCTTGATCCTGAATTAGTCGGCGAGGTGCTTAATACGAT
TCGCCAGCTGGCGCAGGAAAAGCGCACGATGGTGATCGTCACTCACGAAATGGGCTTTGCGCGTGACGTGGCTGACCGGG
CAATATTTATGGATCAGGGGCAAATCGTCGAGCAGGGGCCGGCGAAAACCTTGTTCGCCGATCCTCAGCATCCGCGTACC
CGCCAGTTCCTTGAGAAATTTTTAGTGAAATAA

Protein sequence : 
MSAIEVTNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIKVGDIIIDTARPFSQQKGLI
RQLRQHVGFVFQSFNLFPHRTVLENIIEGPVIVKGEPKAEATALARELLAKVGLAGKETRYPRRLSGGQQQRVAIARALA
MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMGFARDVADRAIFMDQGQIVEQGPAKTLFADPQHPRT
RQFLEKFLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_19035 YP_008247860.1 amino-acid ABC transporter ATP-binding protein YecC NC_012469.1.7686878. Protein 6e-25 43