Gene Information

Name : SEEH1578_16340 (SEEH1578_16340)
Accession : YP_008247327.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaT
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3294480 - 3295259 bp
Length : 780 bp
Strand : +
Note : COG4791 Type III secretory pathway, component EscT

DNA sequence :
ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTGAGCCTCTCTTTATTACTTCC
CCTATTAAAAAGTGGCAGTTTAGGGTCCGCGATTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT
GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG
CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGCATCAGCTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCTTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGTGATAAGTTTTATATTTATCTGAAAGACTGGTTCCCATCTGTATGA

Protein sequence :
MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGSAILRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFFSMPLKSILVLLTLLISFPYALHH
YLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 1e-99 99
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-99 99
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 1e-99 99
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 1e-99 99
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 9e-100 99
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 1e-45 51
escT AFO66312.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-23 41
escT AFO66402.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16340 YP_008247327.1 type III secretion system protein SsaT VFG0521 Protein 6e-100 99