Gene Information

Name : SEEH1578_16295 (SEEH1578_16295)
Accession : YP_008247318.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3287078 - 3288070 bp
Length : 993 bp
Strand : +
Note : -

DNA sequence :
ATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCAGGTTATAGAGGAACAAGAGGT
TATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAG
GAATGGCGCTGAGTGGTAAACTGCGCGAAAATTATAAATTCACTGATGCTGAGAAACTGGAGCGCAGACAGCAGGCTTTG
CTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTT
ACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGC
AATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGAT
ACCGCTACGCTGTCCTCTCTGAAACGTTTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAG
ACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCCATAGCCTTTGAACTTAGCATATGCA
TCGAACCTTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTGCTGTTATTCCTTGGCCTTGAAAAA
GAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATCATTTGTGAGCG
CTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGTTACTCCAAC
AACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTT
CGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Protein sequence :
MNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEKLERRQQAL
LRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKINQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 1e-130 99
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-131 99
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 1e-131 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 7e-128 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 7e-128 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16295 YP_008247318.1 type III secretion system protein SsaL VFG0512 Protein 7e-132 99