|
Name : SEEH1578_16290 (SEEH1578_16290) Accession : YP_008247317.1 Strain : Salmonella enterica 41578 Genome accession: NC_021810 Putative virulence/resistance : Virulence Product : type III secretion system protein SsaK Function : - COG functional category : - COG ID : - EC number : - Position : 3286414 - 3287088 bp Length : 675 bp Strand : + Note : - DNA sequence : ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAC ATTACAATTAACTTTATTTGCGCAAGAGCAACAAGCTAAGAGCGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGCTTGCGT AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACATTTACAAGACGATGAAAATCAATTTCG TTCATTGGTCGATCACGCAGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT CCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA GGCTGAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA ATGGTGAAGATAAAAGAGGTCGCGATGAATATTAA Protein sequence : MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKSVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLR KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGRDEY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaK | YP_216419.1 | secretion system apparatus protein SsaK | Virulence | SPI-2 | Protein | 6e-99 | 99 |
| ssaK | NP_460376.1 | type III secretion system apparatus protein | Virulence | SPI-2 | Protein | 2e-101 | 99 |
| ssaK | CAA70533.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 1e-100 | 99 |
| STY1709 | NP_456117.1 | putative pathogenicity island protein | Virulence | SPI-2 | Protein | 8e-99 | 98 |
| t1279 | NP_805082.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 8e-99 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEH1578_16290 | YP_008247317.1 | type III secretion system protein SsaK | VFG0511 | Protein | 9e-102 | 99 |
