Gene Information

Name : SEEH1578_16280 (SEEH1578_16280)
Accession : YP_008247315.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : type III secretion system lipoprotein SsaJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3285102 - 3285851 bp
Length : 750 bp
Strand : +
Note : COG4669 Type III secretory pathway, lipoprotein EscJ

DNA sequence :
ATGAAGGTTCATCGTATAGTATTTCTTACTGTCCTTACGTTCTTTCTTACGGCATGTGATGTGGATCTTTATCGCTCATT
GCCAGAGGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGAAAAAAAACAGGAAGAGGACG
GTGTTACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTAACGGTTATCCGCATCGTCAG
TTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAACAGCAGAAGATTAATTTTTT
AAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGTGACCATTGCGCTACCGACTT
ATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTCAGGTCAATATGGAGGCCTTT
CGGGTAAAAATTAAAGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATTAGTATCTTGATGCAGCCTGC
TGAATTCAGAATGGTACCTGATGTACCCGCGAGACAAACATTCTGGATTATGGACGTGATCAACGCCAATAAAGGGAAGG
TGGAGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTATTAGGAGTGGGCATCCTGATC
GGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MKVHRIVFLTVLTFFLTACDVDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQ
FTTADKMFPANQLVVSPQEEQQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAF
RVKIKDLIEMSIPGLQYSKISILMQPAEFRMVPDVPARQTFWIMDVINANKGKVEKWLMKYPYQLMLSLTGLLLGVGILI
GYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 2e-106 100
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 5e-86 100
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 9e-106 99
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 4e-105 99
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 6e-105 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 9e-106 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 8e-50 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16280 YP_008247315.1 type III secretion system lipoprotein SsaJ VFG0510 Protein 2e-105 99