Gene Information

Name : SEEH1578_16255 (SEEH1578_16255)
Accession : YP_008247310.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3282800 - 3283582 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGT
ATCGTTTCCTCCCCCTGAAATTCCAGCGCCTGGCACCCCCGCAGCCCCTGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAGGGATTATGCTATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGGTTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATTGATATGTCAGCAAAAGGAGCCGTTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGTGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTTATTAATA
CGTTCAGGAATCGCTATTTCTATGTTGGTTTTACCCCTACAGTTTCCACTGCCCGCCGCTGAAAATATAGCGGCCTCTTT
GGATATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCTTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTCATGCCGATCCCAGTGCGTTATTGGCGGAACAAATGGCAGCGCTCTGT
CAATCTGCTACTGCACCTGCATTAATGGACAGTTCTGGTCATACATCTCGGGGAGAACCATGA

Protein sequence : 
MKIHIPSAASNIVDGNSPPSDIQAKEVSFPPPEIPAPGTPAAPVLLTPEQIRQQRDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQLICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
RSGIAISMLVLPLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCFARPSGDDQENSVDELHADPSALLAEQMAALC
QSATAPALMDSSGHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 2e-89 99
sseF AAC28885.1 SseF Virulence SPI-2 Protein 2e-89 99
sseF CAA12191.1 SseF Virulence SPI-2 Protein 3e-88 98
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 2e-86 97
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 2e-88 97
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 2e-88 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16255 YP_008247310.1 pathogenicity island 2 effector protein SseF VFG0505 Protein 9e-90 99