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Name : SEEH1578_16235 (SEEH1578_16235) Accession : YP_008247306.1 Strain : Salmonella enterica 41578 Genome accession: NC_021810 Putative virulence/resistance : Virulence Product : pathogenicity island 2 effector protein SseC Function : - COG functional category : - COG ID : - EC number : - Position : 3279822 - 3281276 bp Length : 1455 bp Strand : + Note : COG5613 Uncharacterized conserved protein DNA sequence : ATGAATCGAATTCACAGTAATAGCGATAGCGCCGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGTTG CGTTTCCTCGGGTTCGCTGGGAAAGCGCCAGCATCGTGTGAATTCTACTTTTGGCGATGGCAACGCCGCGTGTCTGCTAT CCGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTTGAAGCAACTGCTTGATGCCGTACCCGGAAATCATAAGCGTCCA TCATTGCCTGACTTTTTGCAGACCAATCCCGCGGTTTTATCAATGTTGATGACGACATTAATACTCAGCGTTTTTGGTAA TAACGCTCAATCGTTATGCCAACAGCTTGAGCGGGCAACTGAGGTGCAAAATGCATTACGTGATAAGCAGGTAAAGGAGT ATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGATAAAGCGCGTAAAGCGGGCATTTTTGGCGCTATTTTTGACTGG ATTACCGGCATATTTGAAACCGTGATTGGCGCCTTAAAAGTTGTGGAAGGTTTTCTGTCCGGTAATCCCGCAGAAATGGC TAGCGGCGTAGCTTATATGGCCGCAGGTTGTGCAGGAATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTG ACCACGATACCTGTCAGGCGATTATTGACGTGACAAGTAAGATTCAATTTGGTTGTGAAGCCGTCGCGCTGGCACTGGAT GTTTTCCAGATTGGCCGTGCTTTTATGGCGACGAGAGGTTTATCTGGCGCAGCTGCAAAAGTGCTTGACTCCGGTTTTGG CGAGGAAATGGTTGAGCGTATGGTAGGTGCAGGGGAAGCAGAAATAGAGGCGTTGGCTGAAAAGTTTGGCGAAGAAGTGA GCGAAAGTTTTTCCAAACAATTTGAGCCGCTTGAACGTGAAATGGCTATGGCGAATGAGATGGCAGAGGAGGCTGCCGAG TTTTCTCGTAACGTAGAAAATAATATGACGCGAAGCGCGGGAAAAAGCTTTACGAAAGAGGGGGTGAAAGCCATGGCAAA AGAAGCGGCAAAAGAAGCCCTGGAAAAATGTGTGCAAGAAGGGGAAAAGTTTCTGTTAAAAAATTTTCGTAATAAAGTTC TCTTCAATATGTTCAAAAAAATCCTGTATGCCTTACTGAGGGATTGTTCATTTAAAGGCTTACAGGCTATCAGATGTGCA ACCGAGGGTGCCAATCAGATGAATACTGGCATGGTTAACACAGAAAAAGCGAAGCTTGAAAAGAAAATAGAGCAATTAAT AACTCAGCAACGGTTTCTGGATTTCATAATGCAACAAACGGATGACCAAAAAAAGATAGAACAAAAACGCTTAGAGGAGC TTTATAAGGGTAGCGGTGCCGCGCTTAGAGATGTATTAGATACCATTGATCACTATAGTAGCGTTCAGGCGAGAATAGCT GGCTGGCGCGCTTAA Protein sequence : MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRP SLPDFLQTNPAVLSMLMTTLILSVFGNNAQSLCQQLERATEVQNALRDKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW ITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVGAGEAEIEALAEKFGEEVSESFSKQFEPLEREMAMANEMAEEAAE FSRNVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCVQEGEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCA TEGANQMNTGMVNTEKAKLEKKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA GWRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sseC | NP_460365.1 | translocation machinery component | Virulence | SPI-2 | Protein | 0.0 | 98 |
| sseC | CAA12187.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 98 |
| sseC | AAC28881.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 98 |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 97 |
| sseC | NP_805071.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 97 |
| sseC | YP_216408.1 | secretion system effector protein SseC | Virulence | SPI-2 | Protein | 0.0 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SEEH1578_16235 | YP_008247306.1 | pathogenicity island 2 effector protein SseC | VFG0501 | Protein | 0.0 | 98 |
