Gene Information

Name : SEEH1578_16230 (SEEH1578_16230)
Accession : YP_008247305.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 chaperone protein SscA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3279346 - 3279819 bp
Length : 474 bp
Strand : +
Note : COG0457 FOG: TPR repeat

DNA sequence :
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTCTGTATCGCTATGCCATGCAGCTTATGGAGGTAAAAGAGTTCGCCGGCG
CAGCGCGACTTTTTCAATTGTTGACGATATATGATGCCTGGTCATTTGACTATTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTATTATGCAATCAAAGCGTTAAAGGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATTCTCCGACAGCGTGCAGAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence :
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVYYAIKALKAVVRICGEVSEHQILRQRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 3e-68 99
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 2e-68 99
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 2e-68 99
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 7e-69 99
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 5e-69 99
sscA CAA12186.1 SscA Virulence SPI-2 Protein 5e-69 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16230 YP_008247305.1 pathogenicity island 2 chaperone protein SscA VFG0500 Protein 2e-69 99